RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 HSPB3Q12988 150 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 TRAF3Q13114 568 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 TMED1Q13445 227 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 SLC17A1Q14916 467 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 PPP1R7Q15435 360 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 DUSP5Q16690 384 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 TRMT5Q32P41 509 aaKnown RBP2.94□□□□□ -1.94
LRCH3-217ENST00000483442 ATP6AP1LQ52LC2 224 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 SYT14P1Q58G82 188 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.94□□□□□ -1.94
LRCH3-217ENST00000483442 TMEM268Q5VZI3 342 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 STEAP4Q687X5 459 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 TMEM225Q6GV28 225 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 CDC73Q6P1J9 531 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 BRD3OSQ6XYD6 125 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 ZNF620Q6ZNG0 422 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 Q6ZSV7 163 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 LINGO2Q7L985 606 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 CMC1Q7Z7K0 106 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 GPAT4Q86UL3 456 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 ARMC8Q8IUR7 673 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 ZBED8Q8IZ13 594 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 CADM3Q8N126 398 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 LYG1Q8N1E2 194 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 PARP8Q8N3A8 854 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 COX18Q8N8Q8 333 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 CDRT4Q8N9R6 151 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 POMGNT2Q8NAT1 580 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 NEXN-AS1Q8NBZ9 246 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 FBXO36Q8NEA4 188 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 Q8NFD4 153 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 OR10S1Q8NGN2 331 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 KIF18AQ8NI77 898 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 ZNF563Q8TA94 476 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 RAB40AQ8WXH6 277 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 CNOT9Q92600 299 aaKnown RBP2.94□□□□□ -1.94
LRCH3-217ENST00000483442 MS4A14Q96JA4 679 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 C16orf45Q96MC5 204 aaPredicted RBP2.94□□□□□ -1.94
LRCH3-217ENST00000483442 AMDHD1Q96NU7 426 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 TSPAN32Q96QS1 320 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 RBBP8Q99708 897 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 NAA11Q9BSU3 229 aaPredicted RBP2.94□□□□□ -1.94
LRCH3-217ENST00000483442 EBPLQ9BY08 206 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 LAT2Q9GZY6 243 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 HOXD1Q9GZZ0 328 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 MMADHCQ9H3L0 296 aaPredicted RBP2.94□□□□□ -1.94
LRCH3-217ENST00000483442 RABEP2Q9H5N1 569 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 BRF2Q9HAW0 419 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 HINT3Q9NQE9 182 aaKnown RBP2.94□□□□□ -1.94
LRCH3-217ENST00000483442 MIEF1Q9NQG6 463 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 CTPS2Q9NRF8 586 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 TMEM181Q9P2C4 612 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 NLKQ9UBE8 527 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 KCNG2Q9UJ96 466 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 ZNF346Q9UL40 294 aaKnown RBP2.94□□□□□ -1.94
LRCH3-217ENST00000483442 GRID1Q9ULK0 1009 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 SNX6Q9UNH7 406 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 DHDHQ9UQ10 334 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 TRAPPC4Q9Y296 219 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 SLC9A8Q9Y2E8 581 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 INSIG2Q9Y5U4 225 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 KCNE3Q9Y6H6 103 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 TEX264Q9Y6I9 313 aa2.94□□□□□ -1.94
LRCH3-217ENST00000483442 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 A0A0A0MQY5 61 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 TRAV40A0A0B4J280 105 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 ZNF816-ZNF321PA0A0X1KG74 233 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 GAGE12JA6NER3 117 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 C3orf84H3BNL1 204 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 MANBAO00462 879 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 UBE2CO00762 179 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 DNALI1O14645 258 aaPredicted RBP2.93□□□□□ -1.94
LRCH3-217ENST00000483442 TXNL1O43396 289 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 TRAF3IP2O43734 574 aaPredicted RBP2.93□□□□□ -1.94
LRCH3-217ENST00000483442 XPNPEP2O43895 674 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 GPR137BO60478 399 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 EIF4E2O60573 245 aaKnown RBP2.93□□□□□ -1.94
LRCH3-217ENST00000483442 EIF1BO60739 113 aaKnown RBP2.93□□□□□ -1.94
LRCH3-217ENST00000483442 SCN2BO60939 215 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 TSPAN9O75954 239 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 OR4F21O95013 312 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 AKR7A3O95154 331 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 HLA-HP01893 362 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 SFTPBP07988 381 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 UBTFL6P0CB48 400 aaPredicted RBP2.93□□□□□ -1.94
LRCH3-217ENST00000483442 UBL4AP11441 157 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 BCKDHAP12694 445 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 ZNF35P13682 527 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 EFNA1P20827 205 aaPredicted RBP2.93□□□□□ -1.94
LRCH3-217ENST00000483442 CRABP2P29373 138 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 SSTR1P30872 391 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 LCN1P31025 176 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 HOXD3P31249 432 aaPredicted RBP2.93□□□□□ -1.94
LRCH3-217ENST00000483442 SPRP35270 261 aaPredicted RBP2.93□□□□□ -1.94
LRCH3-217ENST00000483442 APOBEC1P41238 236 aaKnown RBP2.93□□□□□ -1.94
LRCH3-217ENST00000483442 ALDH3A2P51648 485 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 ATP12AP54707 1039 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 AQP5P55064 265 aa2.93□□□□□ -1.94
LRCH3-217ENST00000483442 SEC61A1P61619 476 aaKnown RBP2.93□□□□□ -1.94
LRCH3-217ENST00000483442 SLC35A1P78382 337 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms