RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 GALNT14Q96FL9 552 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 CNDP1Q96KN2 507 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 PKNOX2Q96KN3 472 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 SERPINB12Q96P63 405 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 ATP5SQ99766 215 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 CENPKQ9BS16 269 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 SLC25A2Q9BXI2 301 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 LSM7Q9UK45 103 aaKnown RBP2.02□□□□□ -2.09
LTN1-204ENST00000475344 TMED5Q9Y3A6 229 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 CNTNAP1P78357 1384 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 TRBV11-1A0A0K0K1C0 115 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 GLYATL1P3A0A0U1RQE8 302 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 TMEM223A0PJW6 202 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 SMCO3A2RU48 225 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 FAM47DPA6NHR8 397 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 LRRIQ3A6PVS8 624 aaPredicted RBP2.01□□□□□ -2.09
LTN1-204ENST00000475344 C17orf51A8MQB3 221 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 F6UB75 175 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 PPP1R2P9O14990 202 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 RP2O75695 350 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 CCNKO75909 580 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 CLPXO76031 633 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 GNAO1P09471 354 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 WARSP23381 471 aaKnown RBP2.01□□□□□ -2.09
LTN1-204ENST00000475344 RRM2P31350 389 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 ACTG2P63267 376 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 SLC39A6Q13433 755 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 QPRTQ15274 297 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 SASS6Q6UVJ0 657 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 NIPA1Q7RTP0 329 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 OR2A1Q8NGT9 310 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 RAB3IL1Q8TBN0 382 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 SLC38A4Q969I6 547 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 TM4SF18Q96CE8 201 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 NEURL3Q96EH8 262 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 ZNF681Q96N22 645 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 CDX2Q99626 313 aaPredicted RBP2.01□□□□□ -2.09
LTN1-204ENST00000475344 CCDC77Q9BR77 488 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 NUP58Q9BVL2 599 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 SYNDIG1Q9H7V2 258 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 UBE2ZQ9H832 354 aaPredicted RBP2.01□□□□□ -2.09
LTN1-204ENST00000475344 FGF20Q9NP95 211 aaPredicted RBP2.01□□□□□ -2.09
LTN1-204ENST00000475344 SAMSN1Q9NSI8 373 aaKnown RBP2.01□□□□□ -2.09
LTN1-204ENST00000475344 UVRAGQ9P2Y5 699 aa2.01□□□□□ -2.09
LTN1-204ENST00000475344 UXTQ9UBK9 157 aaPredicted RBP2.01□□□□□ -2.09
LTN1-204ENST00000475344 CARHSP1Q9Y2V2 147 aaKnown RBP2.01□□□□□ -2.09
LTN1-204ENST00000475344 MRPS18BQ9Y676 258 aaKnown RBP2.01□□□□□ -2.09
LTN1-204ENST00000475344 ZNF816-ZNF321PA0A0X1KG74 233 aa2□□□□□ -2.09
LTN1-204ENST00000475344 GOLGA8OA6NCC3 632 aa2□□□□□ -2.09
LTN1-204ENST00000475344 ZNF850A8MQ14 1090 aa2□□□□□ -2.09
LTN1-204ENST00000475344 LYRM9A8MSI8 78 aa2□□□□□ -2.09
LTN1-204ENST00000475344 C9JVG2 144 aa2□□□□□ -2.09
LTN1-204ENST00000475344 SPECC1L-ADORA2AF8WAN1 911 aa2□□□□□ -2.09
LTN1-204ENST00000475344 GOLGA8NF8WBI6 632 aa2□□□□□ -2.09
LTN1-204ENST00000475344 NDUFAB1O14561 156 aa2□□□□□ -2.09
LTN1-204ENST00000475344 AIM2O14862 343 aa2□□□□□ -2.09
LTN1-204ENST00000475344 RAB29O14966 203 aa2□□□□□ -2.09
LTN1-204ENST00000475344 CLOCKO15516 846 aa2□□□□□ -2.09
LTN1-204ENST00000475344 KLHL41O60662 606 aa2□□□□□ -2.09
LTN1-204ENST00000475344 CLIC3O95833 236 aa2□□□□□ -2.09
LTN1-204ENST00000475344 KRT14P02533 472 aa2□□□□□ -2.09
LTN1-204ENST00000475344 BCHEP06276 602 aa2□□□□□ -2.09
LTN1-204ENST00000475344 PBLDP30039 288 aaPredicted RBP2□□□□□ -2.09
LTN1-204ENST00000475344 HNRNPH3P31942 346 aaKnown RBP2□□□□□ -2.09
LTN1-204ENST00000475344 CEACAM6P40199 344 aa2□□□□□ -2.09
LTN1-204ENST00000475344 TMED10P49755 219 aaKnown RBP2□□□□□ -2.09
LTN1-204ENST00000475344 RAB10P61026 200 aa2□□□□□ -2.09
LTN1-204ENST00000475344 MXD1Q05195 221 aa2□□□□□ -2.09
LTN1-204ENST00000475344 MAB21L1Q13394 359 aa2□□□□□ -2.09
LTN1-204ENST00000475344 PGGHGQ32M88 737 aa2□□□□□ -2.09
LTN1-204ENST00000475344 FAM78AQ5JUQ0 283 aa2□□□□□ -2.09
LTN1-204ENST00000475344 SPIN3Q5JUX0 258 aa2□□□□□ -2.09
LTN1-204ENST00000475344 ARMC12Q5T9G4 340 aa2□□□□□ -2.09
LTN1-204ENST00000475344 C9orf135Q5VTT2 229 aa2□□□□□ -2.09
LTN1-204ENST00000475344 SPECC1LQ69YQ0 1117 aa2□□□□□ -2.09
LTN1-204ENST00000475344 ARL9Q6T311 187 aa2□□□□□ -2.09
LTN1-204ENST00000475344 ZYG11AQ6WRX3 759 aa2□□□□□ -2.09
LTN1-204ENST00000475344 CDH26Q8IXH8 852 aa2□□□□□ -2.09
LTN1-204ENST00000475344 PRSS58Q8IYP2 241 aa2□□□□□ -2.09
LTN1-204ENST00000475344 IQCKQ8N0W5 287 aa2□□□□□ -2.09
LTN1-204ENST00000475344 ELMO1Q92556 727 aa2□□□□□ -2.09
LTN1-204ENST00000475344 N4BP2L2Q92802 583 aaPredicted RBP2□□□□□ -2.09
LTN1-204ENST00000475344 NTAN1Q96AB6 310 aa2□□□□□ -2.09
LTN1-204ENST00000475344 DNAJC1Q96KC8 554 aaKnown RBP2□□□□□ -2.09
LTN1-204ENST00000475344 ZNF382Q96SR6 550 aa2□□□□□ -2.09
LTN1-204ENST00000475344 DOK1Q99704 481 aa2□□□□□ -2.09
LTN1-204ENST00000475344 SAV1Q9H4B6 383 aaPredicted RBP2□□□□□ -2.09
LTN1-204ENST00000475344 CTSFQ9UBX1 484 aa2□□□□□ -2.09
LTN1-204ENST00000475344 LGALS13Q9UHV8 139 aa2□□□□□ -2.09
LTN1-204ENST00000475344 PCNX2A6NKB5 2137 aa2□□□□□ -2.09
LTN1-204ENST00000475344 PTPRTO14522 1441 aa2□□□□□ -2.09
LTN1-204ENST00000475344 A8MUU9 505 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 SIRPB1O00241 398 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 DPM1O60762 260 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 TSPAN13O95857 204 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 AGTP01019 485 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 OR56A5P0C7T3 313 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 MAS1LP35410 378 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 GPX4P36969 197 aaPredicted RBP1.99□□□□□ -2.09
LTN1-204ENST00000475344 SLC1A1P43005 524 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms