RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 CNTNAP1P78357 1384 aa1.33□□□□□ -2.2
RBM39-228ENST00000471635 J3QRE1 110 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 PPP1R2P9O14990 202 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 MRPS12O15235 138 aaKnown RBP1.32□□□□□ -2.2
RBM39-228ENST00000471635 DPM1O60762 260 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 HLA-DQA1P01909 254 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 UBTFL6P0CB48 400 aaPredicted RBP1.32□□□□□ -2.2
RBM39-228ENST00000471635 CALM1P0DP23 149 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 CALM2P0DP24 149 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 CALM3P0DP25 149 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 MX1P20591 662 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 PRPHP41219 470 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 CRYBB2P43320 205 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 GDI2P50395 445 aaKnown RBP1.32□□□□□ -2.2
RBM39-228ENST00000471635 PLP1P60201 277 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 ACTG2P63267 376 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 MRPS22P82650 360 aaKnown RBP1.32□□□□□ -2.2
RBM39-228ENST00000471635 MXD1Q05195 221 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 PRKCDQ05655 676 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 MEF2CQ06413 473 aaPredicted RBP1.32□□□□□ -2.2
RBM39-228ENST00000471635 BST1Q10588 318 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 CLINT1Q14677 625 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 PTPN20Q4JDL3 420 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 CASC1Q6TDU7 716 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 PLET1Q6UQ28 207 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 KDELC1Q6UW63 502 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 Q6ZSR3 168 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 OR4K5Q8NGD3 323 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 OR13G1Q8NGZ3 307 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 CIRBP-AS1Q8TBR5 109 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 PHOSPHO2Q8TCD6 241 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 TUBGCP3Q96CW5 907 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 KLF6Q99612 283 aaPredicted RBP1.32□□□□□ -2.2
RBM39-228ENST00000471635 LRRC40Q9H9A6 602 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 HYPKQ9NX55 129 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 UVRAGQ9P2Y5 699 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 CTSFQ9UBX1 484 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 ST3GAL6Q9Y274 331 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 CAMTA1Q9Y6Y1 1673 aa1.32□□□□□ -2.2
RBM39-228ENST00000471635 A0A0U1RQV1 116 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 ZNF816-ZNF321PA0A0X1KG74 233 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 ARHGEF35A5YM69 484 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 YIF1AO95070 293 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 CLIC3O95833 236 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 SERPIND1P05546 499 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 ZNF43P17038 809 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 DCKP27707 260 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 HNRNPH3P31942 346 aaKnown RBP1.31□□□□□ -2.2
RBM39-228ENST00000471635 CASP14P31944 242 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 IFNA8P32881 189 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 YWHAGP61981 247 aaKnown RBP eCLIP1.31□□□□□ -2.2
RBM39-228ENST00000471635 RPS11P62280 158 aaKnown RBP eCLIP1.31□□□□□ -2.2
RBM39-228ENST00000471635 BST2Q10589 180 aaKnown RBP1.31□□□□□ -2.2
RBM39-228ENST00000471635 TCP10Q12799 353 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 ECH1Q13011 328 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 CCNJQ5T5M9 372 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 AP1ARQ63HQ0 302 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 ANKRD26P1Q6NSI1 321 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 RGS9BPQ6ZS82 235 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 NIPA1Q7RTP0 329 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 TBC1D21Q8IYX1 336 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 PDIK1LQ8N165 341 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 EID2Q8N6I1 236 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 ST20-AS1Q8NBB2 130 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 OR5M1Q8NGP8 315 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 OR9A2Q8NGT5 310 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 LILRB4Q8NHJ6 448 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 RHEBL1Q8TAI7 183 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 CXorf40AQ8TE69 158 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 PIBF1Q8WXW3 757 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 NT5C3BQ969T7 300 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 FLYWCH2Q96CP2 140 aaKnown RBP1.31□□□□□ -2.2
RBM39-228ENST00000471635 SERPINB12Q96P63 405 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 ZBTB18Q99592 522 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 SHANK2-AS3Q9BTD1 123 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 PARP12Q9H0J9 701 aaKnown RBP1.31□□□□□ -2.2
RBM39-228ENST00000471635 KCNJ16Q9NPI9 418 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 ETNK2Q9NVF9 386 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 SUN2Q9UH99 717 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 LSM7Q9UK45 103 aaKnown RBP1.31□□□□□ -2.2
RBM39-228ENST00000471635 IKZF2Q9UKS7 526 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 ING4Q9UNL4 249 aa1.31□□□□□ -2.2
RBM39-228ENST00000471635 TSSC4Q9Y5U2 329 aaPredicted RBP1.31□□□□□ -2.2
RBM39-228ENST00000471635 BAZ2AQ9UIF9 1905 aaKnown RBP1.3□□□□□ -2.2
RBM39-228ENST00000471635 IGHV3OR16-8A0A075B7F1 116 aa1.3□□□□□ -2.2
RBM39-228ENST00000471635 FAM240BA0A1B0GVZ2 78 aa1.3□□□□□ -2.2
RBM39-228ENST00000471635 ZNF98A6NK75 572 aa1.3□□□□□ -2.2
RBM39-228ENST00000471635 J3QKU1 62 aa1.3□□□□□ -2.2
RBM39-228ENST00000471635 DYNC1I1O14576 645 aa1.3□□□□□ -2.2
RBM39-228ENST00000471635 BPY2O14599 106 aa1.3□□□□□ -2.2
RBM39-228ENST00000471635 EEDO75530 441 aaKnown RBP1.3□□□□□ -2.2
RBM39-228ENST00000471635 CLPXO76031 633 aa1.3□□□□□ -2.2
RBM39-228ENST00000471635 CST1P01037 141 aa1.3□□□□□ -2.2
RBM39-228ENST00000471635 IGLV6-57P01721 117 aa1.3□□□□□ -2.2
RBM39-228ENST00000471635 CD74P04233 296 aa1.3□□□□□ -2.2
RBM39-228ENST00000471635 OR5H8P0DN80 308 aa1.3□□□□□ -2.2
RBM39-228ENST00000471635 ZNF250P15622 560 aa1.3□□□□□ -2.2
RBM39-228ENST00000471635 TAGLN2P37802 199 aaKnown RBP1.3□□□□□ -2.2
RBM39-228ENST00000471635 SSR4P51571 173 aa1.3□□□□□ -2.2
RBM39-228ENST00000471635 RND2P52198 227 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms