RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 FRRS1LQ9P0K9 344 aa9.75□□□□□ -0.85
SND1-208ENST00000470463 PLEKHB1Q9UF11 243 aaPredicted RBP9.75□□□□□ -0.85
SND1-208ENST00000470463 KLHDC2Q9Y2U9 406 aa9.75□□□□□ -0.85
SND1-208ENST00000470463 LRP12Q9Y561 859 aa9.75□□□□□ -0.85
SND1-208ENST00000470463 PCDHGA9Q9Y5G4 932 aaKnown RBP9.75□□□□□ -0.85
SND1-208ENST00000470463 KCNMB2Q9Y691 235 aa9.75□□□□□ -0.85
SND1-208ENST00000470463 R4GMQ9 66 aa9.75□□□□□ -0.85
SND1-208ENST00000470463 FRYQ5TBA9 3013 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 TRGV5A0A0B4J1U4 118 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 TRBV5-5A0A0J9YX44 114 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 ZNF716A6NP11 495 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 FAM166BA8MTA8 275 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 NOTOA8MTQ0 251 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 ZNF724A8MTY0 619 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 RAMP1O60894 148 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 OCM2P0CE71 109 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 SRMP19623 302 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 PSMB10P40306 273 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 CLDN18P56856 261 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 SCAND1P57086 179 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 RPS11P62280 158 aaKnown RBP eCLIP9.74□□□□□ -0.85
SND1-208ENST00000470463 MRPS34P82930 218 aaKnown RBP9.74□□□□□ -0.85
SND1-208ENST00000470463 DEFB109BQ30KR1 87 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 CARD17Q5XLA6 110 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 LRRN1Q6UXK5 716 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 AAED1Q7RTV5 226 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 ABHD12BQ7Z5M8 362 aaPredicted RBP9.74□□□□□ -0.85
SND1-208ENST00000470463 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.74□□□□□ -0.85
SND1-208ENST00000470463 LSRQ86X29 649 aaPredicted RBP9.74□□□□□ -0.85
SND1-208ENST00000470463 CATSPERDQ86XM0 798 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 MCEMP1Q8IX19 187 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 ZIC4Q8N9L1 334 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 CCDC54Q8NEL0 328 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 SNIP1Q8TAD8 396 aaKnown RBP9.74□□□□□ -0.85
SND1-208ENST00000470463 SLAMF6Q96DU3 332 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 MAP6Q96JE9 813 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 ZNF385AQ96PM9 386 aaKnown RBP9.74□□□□□ -0.85
SND1-208ENST00000470463 PDCD1LG2Q9BQ51 273 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 PRRG4Q9BZD6 226 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 LINC00470Q9BZP3 86 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 ZCCHC4Q9H5U6 513 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 EXO5Q9H790 373 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 SLC24A3Q9HC58 644 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 GLRX2Q9NS18 164 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 ABRACLQ9P1F3 81 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 CKLFQ9UBR5 152 aa9.74□□□□□ -0.85
SND1-208ENST00000470463 IGKV1D-43A0A0B4J1Z2 117 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 TMEM269A0A1B0GVZ9 245 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 TTLL8A6PVC2 850 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 PRR32B1ATL7 298 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 PSMD9O00233 223 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 TFECO14948 347 aaPredicted RBP9.73□□□□□ -0.85
SND1-208ENST00000470463 MAGEB4O15481 346 aaPredicted RBP9.73□□□□□ -0.85
SND1-208ENST00000470463 MRPL33O75394 65 aaKnown RBP9.73□□□□□ -0.85
SND1-208ENST00000470463 GPANK1O95872 356 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 IGHG3P01860 377 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 ZNF24P17028 368 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 CTSSP25774 331 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 HSD11B1P28845 292 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 TNFSF8P32971 234 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 TALDO1P37837 337 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 STARP49675 285 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 CAPZA1P52907 286 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 NANOS3P60323 173 aaKnown RBP9.73□□□□□ -0.85
SND1-208ENST00000470463 PCBD1P61457 104 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 DBPQ10586 325 aaPredicted RBP9.73□□□□□ -0.85
SND1-208ENST00000470463 ECH1Q13011 328 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 SF3B4Q15427 424 aaKnown RBP eCLIP9.73□□□□□ -0.851e-6■■□□□ 13.2
SND1-208ENST00000470463 TAF13Q15543 124 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 RGS21Q2M5E4 152 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 FAM27BQ5VT28 67 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 OR7E24Q6IFN5 339 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 SFXN4Q6P4A7 337 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.73□□□□□ -0.85
SND1-208ENST00000470463 SYT9Q86SS6 491 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 LRRC28Q86X40 367 aaPredicted RBP9.73□□□□□ -0.85
SND1-208ENST00000470463 PARP16Q8N5Y8 322 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 DERL3Q96Q80 235 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 OR14A2Q96R54 314 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 DCLRE1CQ96SD1 692 aaKnown RBP9.73□□□□□ -0.85
SND1-208ENST00000470463 SH3GL3Q99963 347 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 HES7Q9BYE0 225 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 SP140LQ9H930 580 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 BCO1Q9HAY6 547 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 CENPMQ9NSP4 180 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 DKK4Q9UBT3 224 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 GDF2Q9UK05 429 aaPredicted RBP9.73□□□□□ -0.85
SND1-208ENST00000470463 HHLA2Q9UM44 414 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 NOSIPQ9Y314 301 aaKnown RBP9.73□□□□□ -0.85
SND1-208ENST00000470463 ZNF175Q9Y473 711 aa9.73□□□□□ -0.85
SND1-208ENST00000470463 IGHV3-15A0A0B4J1V0 119 aa9.72□□□□□ -0.85
SND1-208ENST00000470463 MEGF11A6BM72 1044 aa9.72□□□□□ -0.85
SND1-208ENST00000470463 CTDSP2O14595 271 aa9.72□□□□□ -0.85
SND1-208ENST00000470463 ZZEF1O43149 2961 aa9.72□□□□□ -0.85
SND1-208ENST00000470463 KLK10O43240 276 aa9.72□□□□□ -0.85
SND1-208ENST00000470463 LRRTM2O43300 516 aa9.72□□□□□ -0.85
SND1-208ENST00000470463 UPK1BO75841 260 aa9.72□□□□□ -0.85
SND1-208ENST00000470463 MPZL1O95297 269 aa9.72□□□□□ -0.85
SND1-208ENST00000470463 FARS2O95363 451 aaKnown RBP9.72□□□□□ -0.85
SND1-208ENST00000470463 CST2P09228 141 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms