RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 EGFL7Q9UHF1 273 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 OPN4Q9UHM6 478 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 NDRG4Q9ULP0 352 aaKnown RBP11.24□□□□□ -0.61
CPSF4-210ENST00000469897 STARD10Q9Y365 291 aa11.24□□□□□ -0.61
CPSF4-210ENST00000469897 J3QLI3 93 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 TIMM8AO60220 97 aaPredicted RBP11.23□□□□□ -0.61
CPSF4-210ENST00000469897 PRSS23O95084 383 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 ABHD16AO95870 558 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 SERPINA1P01009 418 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 CD55P08174 381 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 ADH4P08319 380 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 SLC9A3P48764 834 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 ACTG1P63261 375 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 GUCY1A3Q02108 690 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 CDK5R2Q13319 367 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 IFI44LQ53G44 452 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 C1orf94Q6P1W5 598 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 USP43Q70EL4 1123 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 CBLL1Q75N03 491 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 C1QL2Q7Z5L3 287 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 TSEN54Q7Z6J9 526 aaKnown RBP11.23□□□□□ -0.61
CPSF4-210ENST00000469897 TREML1Q86YW5 311 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 C22orf15Q8WYQ4 148 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 HSH2DQ96JZ2 352 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 SLC6A7Q99884 636 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 PLA2G12AQ9BZM1 189 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 NMNAT1Q9HAN9 279 aaPredicted RBP11.23□□□□□ -0.61
CPSF4-210ENST00000469897 TBCCD1Q9NVR7 557 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 AP3M1Q9Y2T2 418 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 NPTNQ9Y639 398 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 ANK2Q01484 3957 aa11.23□□□□□ -0.61
CPSF4-210ENST00000469897 TRIM77I1YAP6 450 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 NME4O00746 187 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 XKRYO14609 159 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 IMPA2O14732 288 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 SGCEO43556 437 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 SLC16A7O60669 478 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 PTP4A3O75365 173 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 CD14P08571 375 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 COX5BP10606 129 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 COX4I1P13073 169 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 NCK1P16333 377 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 GATA3P23771 443 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 HTR5AP47898 357 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 SLC7A2P52569 658 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 MESTQ5EB52 335 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 Q6ZR03 302 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 OR2Z1Q8NG97 314 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 ST7LQ8TDW4 575 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 FAM216AQ8WUB2 273 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 SLC7A6Q92536 515 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 HAVCR1Q96D42 359 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 FAM46AQ96IP4 442 aaKnown RBP11.22□□□□□ -0.61
CPSF4-210ENST00000469897 HOPXQ9BPY8 73 aaPredicted RBP11.22□□□□□ -0.61
CPSF4-210ENST00000469897 WACQ9BTA9 647 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 MMP26Q9NRE1 261 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 CGGBP1Q9UFW8 167 aaPredicted RBP11.22□□□□□ -0.61
CPSF4-210ENST00000469897 IL20RAQ9UHF4 553 aa11.22□□□□□ -0.61
CPSF4-210ENST00000469897 PURGQ9UJV8 347 aaKnown RBP11.22□□□□□ -0.61
CPSF4-210ENST00000469897 COA3Q9Y2R0 106 aaPredicted RBP11.22□□□□□ -0.61
CPSF4-210ENST00000469897 NBEAL1Q6ZS30 2694 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 TEX13CA0A0J9YWL9 993 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 TMEM89A2RUT3 159 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 PRSS37A4D1T9 235 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 H3BSA7 217 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 SLC22A2O15244 555 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 AHCYL1O43865 530 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 DOK2O60496 412 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 CTLA4P16410 223 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 GSTM3P21266 225 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 GSK3BP49841 420 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 ERFP50548 548 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 SCRN3Q0VDG4 424 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 ZMAT1Q5H9K5 638 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 VASH1Q7L8A9 365 aaPredicted RBP11.21□□□□□ -0.61
CPSF4-210ENST00000469897 FAM122BQ7Z309 247 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 ARPINQ7Z6K5 226 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 ZER1Q7Z7L7 766 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 BPIFB2Q8N4F0 458 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 C3orf56Q8N813 242 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 SLC7A13Q8TCU3 470 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 PTP4A1Q93096 173 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 FAM162AQ96A26 154 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 RASD2Q96D21 266 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 SAMD8Q96LT4 415 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 ZNF570Q96NI8 536 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 JMJD8Q96S16 334 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 SUCNR1Q9BXA5 334 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 EFCAB1Q9HAE3 211 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 TMEM106BQ9NUM4 274 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 PLEK2Q9NYT0 353 aa11.21□□□□□ -0.61
CPSF4-210ENST00000469897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.2□□□□□ -0.623e-16■■■■□ 21.6
CPSF4-210ENST00000469897 TRAPPC2LH3BP13 241 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 KHDRBS3O75525 346 aaKnown RBP11.2□□□□□ -0.62
CPSF4-210ENST00000469897 FOXH1O75593 365 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 NDUFB2O95178 105 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 GPANK1O95872 356 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 IGHV2-70P01814 119 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 TNFRSF1AP19438 455 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 KITLGP21583 273 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms