RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 ARL6IP5O75915 188 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 ACTL6AO96019 429 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 ETV6P41212 452 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 CCR9P51686 369 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 SGCAQ16586 387 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 DEGS2Q6QHC5 323 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 FOXL2NBQ6ZUU3 175 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 AAED1Q7RTV5 226 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 CATSPERDQ86XM0 798 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 SNX29P2Q8IUI4 249 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 PARP16Q8N5Y8 322 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 AP3S1Q92572 193 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 NABP1Q96AH0 204 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 RBM24Q9BX46 236 aaKnown RBP16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 COMMD4Q9H0A8 199 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 MIXL1Q9H2W2 232 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 ABCB9Q9NP78 766 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 SPRR3Q9UBC9 169 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 GTF2A1LQ9UNN4 478 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 WASF3Q9UPY6 502 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 CMAHPQ9Y471 501 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 TRGV5A0A0B4J1U4 118 aa16.59■□□□□ 0.25
CHRNA4-203ENST00000467563 TRAV17A0A0B4J275 112 aa16.59■□□□□ 0.25
CHRNA4-203ENST00000467563 TRBV5-5A0A0J9YX44 114 aa16.59■□□□□ 0.25
CHRNA4-203ENST00000467563 H3BSH0 61 aa16.59■□□□□ 0.25
CHRNA4-203ENST00000467563 TAF4O00268 1085 aa16.59■□□□□ 0.25
CHRNA4-203ENST00000467563 Q499Y3 187 aa16.59■□□□□ 0.25
CHRNA4-203ENST00000467563 HSD17B12Q53GQ0 312 aa16.59■□□□□ 0.25
CHRNA4-203ENST00000467563 FNDC9Q8TBE3 224 aa16.59■□□□□ 0.25
CHRNA4-203ENST00000467563 PHYHIPQ92561 330 aa16.59■□□□□ 0.25
CHRNA4-203ENST00000467563 ZNF416Q9BWM5 594 aa16.59■□□□□ 0.25
CHRNA4-203ENST00000467563 PALMDQ9NP74 551 aa16.59■□□□□ 0.25
CHRNA4-203ENST00000467563 EMC9Q9Y3B6 208 aa16.59■□□□□ 0.25
CHRNA4-203ENST00000467563 R4GMQ9 66 aa16.59■□□□□ 0.25
CHRNA4-203ENST00000467563 CEP295Q9C0D2 2601 aa16.58■□□□□ 0.25
CHRNA4-203ENST00000467563 IGKV3D-15A0A087WSY6 115 aa16.58■□□□□ 0.25
CHRNA4-203ENST00000467563 RER1O15258 196 aa16.58■□□□□ 0.25
CHRNA4-203ENST00000467563 SLC43A1O75387 559 aa16.58■□□□□ 0.25
CHRNA4-203ENST00000467563 H2BFMP0C1H6 154 aa16.58■□□□□ 0.25
CHRNA4-203ENST00000467563 OCM2P0CE71 109 aa16.58■□□□□ 0.25
CHRNA4-203ENST00000467563 PPP5CP53041 499 aa16.58■□□□□ 0.25
CHRNA4-203ENST00000467563 OR2AJ1Q8NGZ0 328 aa16.58■□□□□ 0.25
CHRNA4-203ENST00000467563 CEP19Q96LK0 163 aa16.58■□□□□ 0.25
CHRNA4-203ENST00000467563 NELFAQ9H3P2 528 aa16.58■□□□□ 0.25
CHRNA4-203ENST00000467563 EXO5Q9H790 373 aa16.58■□□□□ 0.25
CHRNA4-203ENST00000467563 B3GAT2Q9NPZ5 323 aa16.58■□□□□ 0.25
CHRNA4-203ENST00000467563 APC2O95996 2303 aa16.58■□□□□ 0.24
CHRNA4-203ENST00000467563 MSR1P21757 451 aa16.58■□□□□ 0.24
CHRNA4-203ENST00000467563 SOX2P48431 317 aa16.58■□□□□ 0.24
CHRNA4-203ENST00000467563 IFITM3Q01628 133 aa16.58■□□□□ 0.24
CHRNA4-203ENST00000467563 ZNF45Q02386 682 aa16.58■□□□□ 0.24
CHRNA4-203ENST00000467563 CEP78Q5JTW2 689 aa16.58■□□□□ 0.24
CHRNA4-203ENST00000467563 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.58■□□□□ 0.24
CHRNA4-203ENST00000467563 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.58■□□□□ 0.24
CHRNA4-203ENST00000467563 WDFY2Q96P53 400 aa16.58■□□□□ 0.24
CHRNA4-203ENST00000467563 G6PC2Q9NQR9 355 aa16.58■□□□□ 0.24
CHRNA4-203ENST00000467563 COMMD3Q9UBI1 195 aa16.58■□□□□ 0.24
CHRNA4-203ENST00000467563 A0A1B0GVG6 124 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 GPR171O14626 319 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 TFECO14948 347 aaPredicted RBP16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 SYNGR4O95473 234 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 ZNF24P17028 368 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 SRMP19623 302 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 RAB3BP20337 219 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 CD40LGP29965 261 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 LSM6P62312 80 aaKnown RBP16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 ENDOGQ14249 297 aaKnown RBP16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 SLC25A35Q3KQZ1 300 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 SPANXN2Q5MJ10 180 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 IDNKQ5T6J7 187 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 SFXN4Q6P4A7 337 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 LINGO2Q7L985 606 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 WDYHV1Q96HA8 205 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 ALKBH3Q96Q83 286 aaPredicted RBP16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 SLC30A2Q9BRI3 323 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 CRLF2Q9HC73 371 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 PNRC2Q9NPJ4 139 aaKnown RBP16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 PAQR5Q9NXK6 330 aaPredicted RBP16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 MCTS1Q9ULC4 181 aaKnown RBP16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 SPENQ96T58 3664 aaKnown RBP16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 MGAQ8IWI9 3026 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 TMEM269A0A1B0GVZ9 245 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 LOC110117498-PIK3R3F6TDL0 507 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 CFL1P23528 166 aaKnown RBP16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 GUCA1AP43080 201 aaPredicted RBP16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 DDI2Q5TDH0 399 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 SNIP1Q8TAD8 396 aaKnown RBP16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 GPR148Q8TDV2 347 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 TMEM45BQ96B21 275 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 SLC25A18Q9H1K4 315 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 B3GNT3Q9Y2A9 372 aa16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 PRRC2CQ9Y520 2896 aaKnown RBP16.57■□□□□ 0.24
CHRNA4-203ENST00000467563 WISP2O76076 250 aa16.56■□□□□ 0.24
CHRNA4-203ENST00000467563 THBS2P35442 1172 aa16.56■□□□□ 0.24
CHRNA4-203ENST00000467563 ZNF84P51523 738 aa16.56■□□□□ 0.24
CHRNA4-203ENST00000467563 FAM206AQ9NX38 181 aa16.56■□□□□ 0.24
CHRNA4-203ENST00000467563 DAPK2Q9UIK4 370 aa16.56■□□□□ 0.24
CHRNA4-203ENST00000467563 OR52A1Q9UKL2 312 aa16.56■□□□□ 0.24
CHRNA4-203ENST00000467563 AK6Q9Y3D8 172 aaKnown RBP16.56■□□□□ 0.24
CHRNA4-203ENST00000467563 V9GYH0 126 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms