RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 RAP1AP62834 184 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 RPS15P62841 145 aaKnown RBP1.86□□□□□ -2.11
ATG3-204ENST00000467275 ACTG2P63267 376 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 SLC25A11Q02978 314 aaKnown RBP1.86□□□□□ -2.11
ATG3-204ENST00000467275 CHRNA6Q15825 494 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 C9orf135Q5VTT2 229 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 DUX4L9Q6RFH8 374 aaPredicted RBP1.86□□□□□ -2.11
ATG3-204ENST00000467275 ZNF493Q6ZR52 646 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 TMEM179Q6ZVK1 233 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 STRADAQ7RTN6 431 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 SCD5Q86SK9 330 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 IQCKQ8N0W5 287 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 LIX1Q8N485 282 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 OR4C5Q8NGB2 326 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 OR10G4Q8NGN3 311 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 OR4S2Q8NH73 311 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 PKNOX2Q96KN3 472 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 SLC29A1Q99808 456 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 OR51M1Q9H341 326 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 NEK6Q9HC98 313 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 ZNF160Q9HCG1 818 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 RAB20Q9NX57 234 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 KIAA1257Q9ULG3 409 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 SHANK1Q9Y566 2161 aa1.86□□□□□ -2.11
ATG3-204ENST00000467275 USP47Q96K76 1375 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 GLYATL1P3A0A0U1RQE8 302 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 ZNF816-ZNF321PA0A0X1KG74 233 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 SMCO3A2RU48 225 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 LRRIQ3A6PVS8 624 aaPredicted RBP1.85□□□□□ -2.11
ATG3-204ENST00000467275 H0YHG0 523 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 K7EM74 188 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 SGK1O00141 431 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 DNALI1O14645 258 aaPredicted RBP1.85□□□□□ -2.11
ATG3-204ENST00000467275 DPM1O60762 260 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 H6PDO95479 791 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 CLIC3O95833 236 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 ANXA5P08758 320 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 ZNF24P17028 368 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 RRM2P31350 389 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 NUTF2P61970 127 aaKnown RBP1.85□□□□□ -2.11
ATG3-204ENST00000467275 ADARB1P78563 741 aaKnown RBP1.85□□□□□ -2.11
ATG3-204ENST00000467275 MXD1Q05195 221 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 SYCNQ0VAF6 134 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 ECH1Q13011 328 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 CLINT1Q14677 625 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 MRPL23Q16540 153 aaKnown RBP1.85□□□□□ -2.11
ATG3-204ENST00000467275 ALKBH6Q3KRA9 238 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 SPANXN2Q5MJ10 180 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 TEX43Q6ZNM6 134 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 BHLHA15Q7RTS1 189 aaPredicted RBP1.85□□□□□ -2.11
ATG3-204ENST00000467275 RIMKLAQ8IXN7 391 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 SLC7A13Q8TCU3 470 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 LKAAEAR1Q8TD35 194 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 FAM3DQ96BQ1 224 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 RBMXL1Q96E39 390 aaKnown RBP1.85□□□□□ -2.11
ATG3-204ENST00000467275 PANX1Q96RD7 426 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 CHP1Q99653 195 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 FAM192AQ9GZU8 254 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 TMEM185BQ9H7F4 350 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 VPS37BQ9H9H4 285 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 GPATCH2LQ9NWQ4 482 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 CD84Q9UIB8 345 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 PITPNC1Q9UKF7 332 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 VANGL2Q9ULK5 521 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 GOLT1BQ9Y3E0 138 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 CENPJQ9HC77 1338 aaPredicted RBP1.85□□□□□ -2.11
ATG3-204ENST00000467275 SHROOM3Q8TF72 1996 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 NINLQ9Y2I6 1382 aa1.85□□□□□ -2.11
ATG3-204ENST00000467275 SDK2Q58EX2 2172 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 A0A075B6Q4 140 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 TRBV9A0A0B4J1U6 114 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 CIB4A0PJX0 185 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 A8MUU9 505 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 SIRPB1O00241 398 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 NDUFAB1O14561 156 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 AIM2O14862 343 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 OR2F2O95006 317 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 CDRT1O95170 752 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 GNAO1P09471 354 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 CALM1P0DP23 149 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 CALM2P0DP24 149 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 CALM3P0DP25 149 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 COL8A2P25067 703 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 SLC1A1P43005 524 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 ZNF138P52744 262 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 PRRX1P54821 245 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 RCN1Q15293 331 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 POU2AF1Q16633 256 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 C22orf42Q6IC83 251 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 TMEM220Q6QAJ8 160 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 ABHD13Q7L211 337 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 SLC16A14Q7RTX9 510 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 HDDC2Q7Z4H3 204 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 OR4A4PQ8NGN8 299 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 ZNF502Q8TBZ5 544 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 MCUR1Q96AQ8 359 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 CREB3L1Q96BA8 519 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 SERPINB12Q96P63 405 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 C20orf24Q9BUV8 137 aa1.84□□□□□ -2.11
ATG3-204ENST00000467275 CHAC1Q9BUX1 264 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms