RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 NDEL1Q9GZM8 345 aa16.02■□□□□ 0.16
SF3A1-205ENST00000463818 METTL17Q9H7H0 456 aaPredicted RBP16.02■□□□□ 0.16
SF3A1-205ENST00000463818 NDUFAF4Q9P032 175 aa16.02■□□□□ 0.16
SF3A1-205ENST00000463818 NDRG4Q9ULP0 352 aaKnown RBP16.02■□□□□ 0.16
SF3A1-205ENST00000463818 SIGLEC7Q9Y286 467 aa16.02■□□□□ 0.16
SF3A1-205ENST00000463818 TRAV20A0A0B4J274 112 aa16.01■□□□□ 0.15
SF3A1-205ENST00000463818 ZSCAN5BA6NJL1 495 aa16.01■□□□□ 0.15
SF3A1-205ENST00000463818 CLDN25C9JDP6 229 aa16.01■□□□□ 0.15
SF3A1-205ENST00000463818 NDUFB2O95178 105 aa16.01■□□□□ 0.15
SF3A1-205ENST00000463818 COX5BP10606 129 aa16.01■□□□□ 0.15
SF3A1-205ENST00000463818 CTLA4P16410 223 aa16.01■□□□□ 0.15
SF3A1-205ENST00000463818 RHCEP18577 417 aa16.01■□□□□ 0.15
SF3A1-205ENST00000463818 PRDX6P30041 224 aa16.01■□□□□ 0.15
SF3A1-205ENST00000463818 LIPAP38571 399 aa16.01■□□□□ 0.15
SF3A1-205ENST00000463818 RASD2Q96D21 266 aa16.01■□□□□ 0.15
SF3A1-205ENST00000463818 TIMD4Q96H15 378 aa16.01■□□□□ 0.15
SF3A1-205ENST00000463818 C7orf34Q96L11 122 aa16.01■□□□□ 0.15
SF3A1-205ENST00000463818 EGLN1Q9GZT9 426 aa16.01■□□□□ 0.15
SF3A1-205ENST00000463818 OCEL1Q9H607 264 aa16.01■□□□□ 0.15
SF3A1-205ENST00000463818 RERGLQ9H628 205 aa16.01■□□□□ 0.15
SF3A1-205ENST00000463818 NRIP3Q9NQ35 241 aa16.01■□□□□ 0.15
SF3A1-205ENST00000463818 DCAF13Q9NV06 445 aaKnown RBP16.01■□□□□ 0.15
SF3A1-205ENST00000463818 TEX13CA0A0J9YWL9 993 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 TRBV4-1A0A0J9YWV2 114 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 H3BSA7 217 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 PLPP2O43688 288 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 SLC16A7O60669 478 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 DEAF1O75398 565 aaPredicted RBP16■□□□□ 0.15
SF3A1-205ENST00000463818 DIRAS1O95057 198 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 ABHD16AO95870 558 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 ADH4P08319 380 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 OMPP47874 163 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 SCRN3Q0VDG4 424 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 PSG7Q13046 419 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 FGD3Q5JSP0 725 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 OTPQ5XKR4 325 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 THSD4Q6ZMP0 1018 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 FAM107BQ9H098 131 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 MSL2Q9HCI7 577 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 TBCCD1Q9NVR7 557 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 ADA2Q9NZK5 511 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 IL20RAQ9UHF4 553 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 ZDHHC8Q9ULC8 765 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 COA3Q9Y2R0 106 aaPredicted RBP16■□□□□ 0.15
SF3A1-205ENST00000463818 ARL2BPQ9Y2Y0 163 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 IER3IP1Q9Y5U9 82 aa16■□□□□ 0.15
SF3A1-205ENST00000463818 IMPA2O14732 288 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 SGCEO43556 437 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 TIMM8AO60220 97 aaPredicted RBP15.99■□□□□ 0.15
SF3A1-205ENST00000463818 DOK2O60496 412 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 GMNNO75496 209 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 KHDRBS3O75525 346 aaKnown RBP15.99■□□□□ 0.15
SF3A1-205ENST00000463818 UBOX5O94941 541 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 MPZL1O95297 269 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 FAM107AO95990 144 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 ITGA2P17301 1181 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 SDHAP31040 664 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 HTR5AP47898 357 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 LIMS1P48059 325 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 KRR1Q13601 381 aaKnown RBP15.99■□□□□ 0.15
SF3A1-205ENST00000463818 SEC23BQ15437 767 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 SPRNQ5BIV9 151 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 MTX3Q5HYI7 312 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 GPR139Q6DWJ6 353 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 VASH1Q7L8A9 365 aaPredicted RBP15.99■□□□□ 0.15
SF3A1-205ENST00000463818 RNF148Q8N7C7 305 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 FAM86B1Q8N7N1 296 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 OR52J3Q8NH60 311 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 RAB39BQ96DA2 213 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 RSRC1Q96IZ7 334 aaKnown RBP15.99■□□□□ 0.15
SF3A1-205ENST00000463818 DIRC2Q96SL1 478 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 SYT4Q9H2B2 425 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 POFUT1Q9H488 388 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 SPAG4Q9NPE6 437 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 G6PC2Q9NQR9 355 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 CGGBP1Q9UFW8 167 aaPredicted RBP15.99■□□□□ 0.15
SF3A1-205ENST00000463818 SAMD4AQ9UPU9 718 aaKnown RBP15.99■□□□□ 0.15
SF3A1-205ENST00000463818 AURKCQ9UQB9 309 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 STARD10Q9Y365 291 aa15.99■□□□□ 0.15
SF3A1-205ENST00000463818 UNC119BA6NIH7 251 aa15.98■□□□□ 0.15
SF3A1-205ENST00000463818 IGHV2-5P01817 119 aa15.98■□□□□ 0.15
SF3A1-205ENST00000463818 CD55P08174 381 aa15.98■□□□□ 0.15
SF3A1-205ENST00000463818 TUBG1P23258 451 aa15.98■□□□□ 0.15
SF3A1-205ENST00000463818 SLC3A1Q07837 685 aa15.98■□□□□ 0.15
SF3A1-205ENST00000463818 CDK5R2Q13319 367 aa15.98■□□□□ 0.15
SF3A1-205ENST00000463818 KRT72Q14CN4 511 aa15.98■□□□□ 0.15
SF3A1-205ENST00000463818 SHQ1Q6PI26 577 aaKnown RBP15.98■□□□□ 0.15
SF3A1-205ENST00000463818 DPY19L2P2Q6ZN68 376 aa15.98■□□□□ 0.15
SF3A1-205ENST00000463818 ZER1Q7Z7L7 766 aa15.98■□□□□ 0.15
SF3A1-205ENST00000463818 CMBLQ96DG6 245 aa15.98■□□□□ 0.15
SF3A1-205ENST00000463818 CCT8L2Q96SF2 557 aa15.98■□□□□ 0.15
SF3A1-205ENST00000463818 GPX7Q96SL4 187 aaPredicted RBP15.98■□□□□ 0.15
SF3A1-205ENST00000463818 GPA33Q99795 319 aa15.98■□□□□ 0.15
SF3A1-205ENST00000463818 TUBG2Q9NRH3 451 aa15.98■□□□□ 0.15
SF3A1-205ENST00000463818 PLEK2Q9NYT0 353 aa15.98■□□□□ 0.15
SF3A1-205ENST00000463818 VSX1Q9NZR4 365 aaPredicted RBP15.98■□□□□ 0.15
SF3A1-205ENST00000463818 SOCS2O14508 198 aa15.97■□□□□ 0.15
SF3A1-205ENST00000463818 PNPP00491 289 aa15.97■□□□□ 0.15
SF3A1-205ENST00000463818 AVPP01185 164 aa15.97■□□□□ 0.15
SF3A1-205ENST00000463818 GSTM3P21266 225 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms