RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 PAX6P26367 422 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 FGF9P31371 208 aaPredicted RBP-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 YWHABP31946 246 aaKnown RBP-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 OTX1P32242 354 aaPredicted RBP-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 AQP2P41181 271 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 NBL1P41271 181 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 GALR1P47211 349 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 CSNK1EP49674 416 aaKnown RBP-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 TFCP2Q12800 502 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 MERTKQ12866 999 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 C1orf61Q13536 156 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 ZNF141Q15928 474 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 MEP1BQ16820 701 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 FUT11Q495W5 492 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 IFI44LQ53G44 452 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 HES3Q5TGS1 186 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 ATL3Q6DD88 541 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 APOBEC3HQ6NTF7 200 aaKnown RBP-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 TBPL2Q6SJ96 375 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 PET117Q6UWS5 81 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 GBP6Q6ZN66 633 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 DGAT2L6Q6ZPD8 337 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 PHF5AQ7RTV0 110 aaKnown RBP-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 ZNF546Q86UE3 836 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 LHFPL3Q86UP9 236 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 TPRA1Q86W33 373 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 MISPQ8IVT2 679 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 CDKL3Q8IVW4 592 aaPredicted RBP-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 Q8IYB0 196 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 DNAAF3Q8N9W5 541 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 OR4K14Q8NGD5 310 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 OR51G2Q8NGK0 314 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 OR5L2Q8NGL0 311 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 RNASE8Q8TDE3 154 aaKnown RBP-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 C10orf105Q8TEF2 133 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 DEFB104AQ8WTQ1 72 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 GEMIN6Q8WXD5 167 aaKnown RBP-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 FGF11Q92914 225 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 CMTM7Q96FZ5 175 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 SEC22AQ96IW7 307 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 ZNF488Q96MN9 340 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 SLC35A5Q9BS91 424 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 NUP58Q9BVL2 599 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 DUSP21Q9H596 190 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 RPAP3Q9H6T3 665 aaPredicted RBP-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 RNF167Q9H6Y7 350 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 SPACA1Q9HBV2 294 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 RNF6Q9Y252 685 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 SSC5DA1L4H1 1573 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 XIRP2A4UGR9 3374 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 DOPEY2Q9Y3R5 2298 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 MAGI2Q86UL8 1455 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 WDR97A6NE52 1622 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 MYO18AQ92614 2054 aaKnown RBP-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 RFX7Q2KHR2 1363 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 EXPH5Q8NEV8 1989 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 CEP250Q9BV73 2442 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 VPS13AQ96RL7 3174 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 A0A1B0GUS0 222 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 RNF222A6NCQ9 220 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 CEACAM18A8MTB9 384 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 LOC110117498-PIK3R3F6TDL0 507 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 C15orf65H3BRN8 121 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 KMOO15229 486 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 TPD52L2O43399 206 aaKnown RBP-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 PLXNA2O75051 1894 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 CYB5R3P00387 301 aaPredicted RBP-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 GAPDHP04406 335 aaKnown RBP-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 UBTFL6P0CB48 400 aaPredicted RBP-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 RNASE3P12724 160 aaKnown RBP-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 AREGP15514 252 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 PTNP21246 168 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 DTYMKP23919 212 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 CASP14P31944 242 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 CTNNB1P35222 781 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 EPS15P42566 896 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 NUMBP49757 651 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 DAP3P51398 398 aaKnown RBP-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 CNN1P51911 297 aaKnown RBP-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 HNRNPFP52597 415 aaKnown RBP-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 EMP2P54851 167 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 OSTNP61366 133 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 RPS14P62263 151 aaKnown RBP-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 ST3GAL4Q11206 333 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 ARHGEF5Q12774 1597 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 TCP10Q12799 353 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 PON3Q15166 354 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 CHI3L2Q15782 390 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 ZSCAN26Q16670 478 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 MICBQ29980 383 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 KRTAP19-5Q3LI72 72 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 FILIP1LQ4L180 1135 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 RNASE13Q5GAN3 156 aaKnown RBP-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 C12orf60Q5U649 245 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 TMED8Q6PL24 325 aaPredicted RBP-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 ABHD13Q7L211 337 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 OLIG3Q7RTU3 272 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 DENND4AQ7Z401 1863 aa-0.68□□□□□ -2.52
TMEM56-204ENST00000463375 GLRX5Q86SX6 157 aa-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms