RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 CT45A1Q5HYN5 189 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 TPTE2P1Q5T6R2 138 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 C12orf54Q6X4T0 127 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 ZNF547Q8IVP9 402 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 CBR4Q8N4T8 237 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 SNX31Q8N9S9 440 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 MDS2Q8NDY4 140 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 DUSP18Q8NEJ0 188 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 CT45A3Q8NHU0 189 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 GLYATL2Q8WU03 294 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 DUS3LQ96G46 650 aaKnown RBP2.14□□□□□ -2.07
VCL-203ENST00000461383 BMFQ96LC9 184 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 ANKRD60Q9BZ19 345 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 PARP12Q9H0J9 701 aaKnown RBP2.14□□□□□ -2.07
VCL-203ENST00000461383 LINC00597Q9H2U6 94 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 IFI27L2Q9H2X8 130 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 MRM3Q9HC36 420 aaKnown RBP2.14□□□□□ -2.07
VCL-203ENST00000461383 DMAP1Q9NPF5 467 aaPredicted RBP2.14□□□□□ -2.07
VCL-203ENST00000461383 ISYNA1Q9NPH2 558 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 TMEM9BQ9NQ34 198 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 ZNF331Q9NQX6 463 aaPredicted RBP2.14□□□□□ -2.07
VCL-203ENST00000461383 OR12D3Q9UGF7 316 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 ZNF223Q9UK11 482 aaPredicted RBP2.14□□□□□ -2.07
VCL-203ENST00000461383 CDC42BPBQ9Y5S2 1711 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 IGHV3-64DA0A0J9YX35 117 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 A0A1W2PRD5 423 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 WI2-2373I1.2A0A1W2PRP0 233 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 C11orf94C9JXX5 98 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 INS-IGF2F8WCM5 200 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 SLC9A3R1O14745 358 aaPredicted RBP2.13□□□□□ -2.07
VCL-203ENST00000461383 HSBP1O75506 76 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 SLC25A14O95258 325 aaPredicted RBP2.13□□□□□ -2.07
VCL-203ENST00000461383 CD160O95971 181 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 HLA-DPB1P04440 258 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 PRPS2P11908 318 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 PEX19P40855 299 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 RND2P52198 227 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 UBE2MP61081 183 aaKnown RBP2.13□□□□□ -2.07
VCL-203ENST00000461383 HERVK_113P61574 105 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 IRF8Q02556 426 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 ZNF33AQ06730 810 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 SPAG1Q07617 926 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 ERCC8Q13216 396 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 ART3Q13508 389 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 ZNF726P1Q15940 193 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 POU2AF1Q16633 256 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 KLHL40Q2TBA0 621 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 HIKESHIQ53FT3 197 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 LCE3CQ5T5A8 94 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 AGBL2Q5U5Z8 902 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 UBE2UQ5VVX9 321 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 GPR107Q5VW38 600 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 SPECC1LQ69YQ0 1117 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 NCCRP1Q6ZVX7 275 aaPredicted RBP2.13□□□□□ -2.07
VCL-203ENST00000461383 SH2D6Q7Z4S9 175 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 VTCN1Q7Z7D3 282 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 ZNF321PQ8N8H1 164 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 ZFP41Q8N8Y5 198 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 INO80EQ8NBZ0 244 aaPredicted RBP2.13□□□□□ -2.07
VCL-203ENST00000461383 OR10J6PQ8NGY7 276 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 OR52E5Q8NH55 327 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 OR51E1Q8TCB6 317 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 NTAN1Q96AB6 310 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 KIAA1143Q96AT1 154 aaPredicted RBP2.13□□□□□ -2.07
VCL-203ENST00000461383 APH1AQ96BI3 265 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 TM4SF18Q96CE8 201 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 CERS2Q96G23 380 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 CEP170P1Q96L14 293 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 NEUROG2Q9H2A3 272 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 RGCCQ9H4X1 137 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 TMEM38AQ9H6F2 299 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 NTN4Q9HB63 628 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 ANAPC11Q9NYG5 84 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 CTSFQ9UBX1 484 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 DDX19BQ9UMR2 479 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 KCNE3Q9Y6H6 103 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 WSB1Q9Y6I7 421 aa2.13□□□□□ -2.07
VCL-203ENST00000461383 PRRC2AP48634 2157 aaKnown RBP2.12□□□□□ -2.07
VCL-203ENST00000461383 PCM1Q15154 2024 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 ARPC4-TTLL3A0A0A6YYG9 625 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 IGHV3-74A0A0B4J1X5 117 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 A0A1B0GVY2 172 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 TSPAN11A1L157 253 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 PLAC8L1A1L4L8 177 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 OR6C74A6NCV1 312 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 SYCE1LA8MT33 242 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 PLPP1O14494 284 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 BCKDKO14874 412 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 CHMP2AO43633 222 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 FLOT1O75955 427 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 IGLV2-23P01705 113 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 EIF4EP06730 217 aaKnown RBP2.12□□□□□ -2.07
VCL-203ENST00000461383 UBTFL6P0CB48 400 aaPredicted RBP2.12□□□□□ -2.07
VCL-203ENST00000461383 PSG2P11465 335 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 MSR1P21757 451 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 OMGP23515 440 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 U2AF2P26368 475 aaKnown RBP eCLIP2.12□□□□□ -2.07
VCL-203ENST00000461383 RFC3P40938 356 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 CSNK1A1P48729 337 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 MNAT1P51948 309 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms