RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 ZNF32P17041 273 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 MSR1P21757 451 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 CRYGSP22914 178 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 GSTT1P30711 240 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 VHLP40337 213 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 HCCSP53701 268 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 CDC42P60953 191 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 HIST1H3AP68431 136 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 PSG4Q00888 419 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 MAD2L1BPQ15013 274 aaPredicted RBP13.6□□□□□ -0.23
VCX3B-204ENST00000453306 PPA1Q15181 289 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 SMN1Q16637 294 aaKnown RBP13.6□□□□□ -0.23
VCX3B-204ENST00000453306 PCK2Q16822 640 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 KLHL12Q53G59 568 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 HIST2H3PS2Q5TEC6 136 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 CORO6Q6QEF8 472 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 C20orf204Q6ZNR8 217 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 HIST2H3AQ71DI3 136 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 MEPCEQ7L2J0 689 aaKnown RBP13.6□□□□□ -0.23
VCX3B-204ENST00000453306 P2RY8Q86VZ1 359 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 KRTAP1-3Q8IUG1 177 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 ZNF584Q8IVC4 421 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 CPEB3Q8NE35 698 aaKnown RBP13.6□□□□□ -0.23
VCX3B-204ENST00000453306 TRUB1Q8WWH5 349 aaKnown RBP13.6□□□□□ -0.23
VCX3B-204ENST00000453306 PIK3IP1Q96FE7 263 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 MS4A3Q96HJ5 214 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 CCL19Q99731 98 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 WNT5BQ9H1J7 359 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 CRNNQ9UBG3 495 aaPredicted RBP13.6□□□□□ -0.23
VCX3B-204ENST00000453306 PCDHGB5Q9Y5G0 923 aa13.6□□□□□ -0.23
VCX3B-204ENST00000453306 FBN3Q75N90 2809 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 IGLV1-44P01699 117 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 CST2P09228 141 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 CD79AP11912 226 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 CBR1P16152 277 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 PPP3CBP16298 524 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 NPR2P20594 1047 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 ZNF83P51522 516 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 GLO1Q04760 184 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 OCLNQ16625 522 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 RSPO1Q2MKA7 263 aaPredicted RBP13.59□□□□□ -0.23
VCX3B-204ENST00000453306 CCDC92Q53HC0 331 aaPredicted RBP13.59□□□□□ -0.23
VCX3B-204ENST00000453306 NXNL2Q5VZ03 156 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 TTC23Q5W5X9 447 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 DNM1P34Q6PK57 102 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 LINC00346Q8IVM7 164 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 ZNF555Q8NEP9 628 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 OR10S1Q8NGN2 331 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 OR6K6Q8NGW6 343 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 AKR7LQ8NHP1 331 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 FBLIM1Q8WUP2 373 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 MAP6Q96JE9 813 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 HS3ST6Q96QI5 342 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 AMELYQ99218 206 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 TEX12Q9BXU0 123 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 UBTD1Q9HAC8 227 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 CYB5R1Q9UHQ9 305 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 MOKQ9UQ07 419 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 KLHDC2Q9Y2U9 406 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 COMMD3-BMI1R4GMX3 469 aa13.59□□□□□ -0.23
VCX3B-204ENST00000453306 FLNAP21333 2647 aaKnown RBP13.59□□□□□ -0.23
VCX3B-204ENST00000453306 IGHV1-18A0A0C4DH31 117 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 PRR32B1ATL7 298 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 ZNF593O00488 134 aaPredicted RBP13.58□□□□□ -0.24
VCX3B-204ENST00000453306 RER1O15258 196 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 PRODHO43272 600 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 APOL3O95236 402 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 ADRA2AP08913 450 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 ZNF14P17017 642 aaPredicted RBP13.58□□□□□ -0.24
VCX3B-204ENST00000453306 PAICSP22234 425 aaKnown RBP13.58□□□□□ -0.24
VCX3B-204ENST00000453306 FMO3P31513 532 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 LSM6P62312 80 aaKnown RBP13.58□□□□□ -0.24
VCX3B-204ENST00000453306 RAB1AP62820 205 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 RAB39AQ14964 217 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 SLC18B1Q6NT16 456 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 CFAP77Q6ZQR2 320 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 SLC16A14Q7RTX9 510 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 CNIH3Q8TBE1 160 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 COX4I2Q96KJ9 171 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 USB1Q9BQ65 265 aaKnown RBP13.58□□□□□ -0.24
VCX3B-204ENST00000453306 OR2H1Q9GZK4 316 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 AMBNQ9NP70 447 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 PNRC2Q9NPJ4 139 aaKnown RBP13.58□□□□□ -0.24
VCX3B-204ENST00000453306 IMPAD1Q9NX62 359 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 ASH2LQ9UBL3 628 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 AMDHD2Q9Y303 409 aa13.58□□□□□ -0.24
VCX3B-204ENST00000453306 IGKV3-15P01624 115 aa13.57□□□□□ -0.24
VCX3B-204ENST00000453306 HLA-DQA2P01906 255 aa13.57□□□□□ -0.24
VCX3B-204ENST00000453306 HTR1FP30939 366 aa13.57□□□□□ -0.24
VCX3B-204ENST00000453306 CAPZA2P47755 286 aa13.57□□□□□ -0.24
VCX3B-204ENST00000453306 NUDT6P53370 316 aa13.57□□□□□ -0.24
VCX3B-204ENST00000453306 UBE2NP61088 152 aaKnown RBP13.57□□□□□ -0.24
VCX3B-204ENST00000453306 SPOCK1Q08629 439 aa13.57□□□□□ -0.24
VCX3B-204ENST00000453306 CDK5R2Q13319 367 aa13.57□□□□□ -0.24
VCX3B-204ENST00000453306 SNCBQ16143 134 aa13.57□□□□□ -0.24
VCX3B-204ENST00000453306 PABPC1L2AQ5JQF8 200 aa13.57□□□□□ -0.24
VCX3B-204ENST00000453306 TEX30Q5JUR7 227 aa13.57□□□□□ -0.24
VCX3B-204ENST00000453306 SLC35D3Q5M8T2 416 aa13.57□□□□□ -0.24
VCX3B-204ENST00000453306 ZNF774Q6NX45 483 aa13.57□□□□□ -0.24
VCX3B-204ENST00000453306 DEPDC4Q8N2C3 294 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms