RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 HBE1P02100 147 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 C2P06681 752 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 CALM1P0DP23 149 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 CALM2P0DP24 149 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 CALM3P0DP25 149 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 ATF6P18850 670 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 COX5AP20674 150 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 YAP1P46937 504 aaKnown RBP3.76□□□□□ -1.81
VPS50-206ENST00000443443 IDH2P48735 452 aaKnown RBP3.76□□□□□ -1.81
VPS50-206ENST00000443443 CCL7P80098 99 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 TLE4Q04727 773 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 CDC20Q12834 499 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 OR5I1Q13606 314 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 MTF1Q14872 753 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 OXA1LQ15070 435 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 SPA17Q15506 151 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 BSXQ3C1V8 233 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 CEACAM19Q7Z692 300 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 NT5DC3Q86UY8 548 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 TMEM25Q86YD3 366 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 ENTHD1Q8IYW4 607 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 DND1Q8IYX4 353 aaKnown RBP3.76□□□□□ -1.81
VPS50-206ENST00000443443 OR4K2Q8NGD2 314 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 OR5B3Q8NH48 314 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 ACTL9Q8TC94 416 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 DYNC2LI1Q8TCX1 351 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 TBCKQ8TEA7 893 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 AP3S1Q92572 193 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 NDRG1Q92597 394 aaKnown RBP3.76□□□□□ -1.81
VPS50-206ENST00000443443 SLC35B4Q969S0 331 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 PTH2Q96A98 100 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 NTAN1Q96AB6 310 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 HSFY1Q96LI6 401 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 EBNA1BP2Q99848 306 aaKnown RBP3.76□□□□□ -1.81
VPS50-206ENST00000443443 C6orf62Q9GZU0 229 aaPredicted RBP3.76□□□□□ -1.81
VPS50-206ENST00000443443 FNDC4Q9H6D8 234 aaPredicted RBP3.76□□□□□ -1.81
VPS50-206ENST00000443443 PANK3Q9H999 370 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 ACP6Q9NPH0 428 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 C19orf12Q9NSK7 152 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 GUCA1BQ9UMX6 200 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 TFR2Q9UP52 801 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 ADGRL3Q9HAR2 1447 aa3.76□□□□□ -1.81
VPS50-206ENST00000443443 TRAV8-7A0A075B6U6 113 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 A0A0A6YYD5 115 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 EFCAB7A8K855 629 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 HACD1B0YJ81 288 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 TMEM238C9JI98 176 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 C11orf98E9PRG8 122 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 G3V3Y1 287 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 CDC7O00311 574 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 SLC9A3R1O14745 358 aaPredicted RBP3.75□□□□□ -1.81
VPS50-206ENST00000443443 ACOX3O15254 700 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 SLC31A1O15431 190 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 MAGEB4O15481 346 aaPredicted RBP3.75□□□□□ -1.81
VPS50-206ENST00000443443 HPGDSO60760 199 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 DUSP11O75319 330 aaKnown RBP3.75□□□□□ -1.81
VPS50-206ENST00000443443 ALOX12BO75342 701 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 SRP72O76094 671 aaKnown RBP3.75□□□□□ -1.81
VPS50-206ENST00000443443 HPP00738 406 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 MYOGP15173 224 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 ATP6V1B2P21281 511 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 CALML3P27482 149 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 CD79BP40259 229 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 ZFP36L2P47974 494 aaKnown RBP3.75□□□□□ -1.81
VPS50-206ENST00000443443 FBXW4P57775 412 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 ERVS71-1P61550 626 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 CYCSP99999 105 aaKnown RBP3.75□□□□□ -1.81
VPS50-206ENST00000443443 SMARCB1Q12824 385 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 STX4Q12846 297 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 SRSF9Q13242 221 aaKnown RBP eCLIP3.75□□□□□ -1.81
VPS50-206ENST00000443443 PSMD5Q16401 504 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 TMEM52BQ4KMG9 183 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 YIF1BQ5BJH7 314 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 VWA2Q5GFL6 755 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 ACTL10Q5JWF8 245 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 TIMM23BQ5SRD1 257 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 ACOT7LQ6ZUV0 252 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 PGAP1Q75T13 922 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 TRAPPC5Q8IUR0 188 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 OR4N5Q8IXE1 308 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 ABHD12Q8N2K0 398 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 Q8N377 158 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 BPIFB2Q8N4F0 458 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 Q8NBF4 154 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 VN1R2Q8NFZ6 395 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 OR2L5Q8NG80 312 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 OR6F1Q8NGZ6 308 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 OR51F2Q8NH61 342 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 ZPLD1Q8TCW7 415 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 CXorf40AQ8TE69 158 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 FAM172AQ8WUF8 416 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 TCTEX1D2Q8WW35 142 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 RAB3CQ96E17 227 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 SGTBQ96EQ0 304 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 NOL4LQ96MY1 436 aaPredicted RBP3.75□□□□□ -1.81
VPS50-206ENST00000443443 STACQ99469 402 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 NKX3-1Q99801 234 aaPredicted RBP3.75□□□□□ -1.81
VPS50-206ENST00000443443 ZNF670Q9BS34 389 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 TMEM59Q9BXS4 323 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 NAT10Q9H0A0 1025 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms