RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 TMCC2O75069 709 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 LCKP06239 509 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 SOD3P08294 240 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 SPARCP09486 303 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 BMP4P12644 408 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 TTKP33981 857 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 SLC25A1P53007 311 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 RAD23AP54725 363 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 RCN1Q15293 331 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 DEFB113Q30KQ7 82 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 ZNF362Q5T0B9 420 aaPredicted RBP13.43□□□□□ -0.26
TREX1-201ENST00000433541 CORO6Q6QEF8 472 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 ARL9Q6T311 187 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 UNQ6126/PRO20091Q6UXV3 157 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 CXXC5Q7LFL8 322 aaKnown RBP13.43□□□□□ -0.26
TREX1-201ENST00000433541 CPOQ8IVL8 374 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 CBR4Q8N4T8 237 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 CCDC168Q8NDH2 2452 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 CPEB3Q8NE35 698 aaKnown RBP13.43□□□□□ -0.26
TREX1-201ENST00000433541 GJC3Q8NFK1 279 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 PERPQ96FX8 193 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 ZNF75AQ96N20 296 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 GRIP2Q9C0E4 1043 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 BEX4Q9NWD9 120 aaPredicted RBP13.43□□□□□ -0.26
TREX1-201ENST00000433541 NDRG4Q9ULP0 352 aaKnown RBP13.43□□□□□ -0.26
TREX1-201ENST00000433541 CREBBPQ92793 2442 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 ARID1AO14497 2285 aa13.43□□□□□ -0.26
TREX1-201ENST00000433541 MAST4O15021 2626 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 RER1O15258 196 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 TFP02787 698 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 OR4A8P0C604 315 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 ZNF35P13682 527 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 NR4A1P22736 598 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 THBS4P35443 961 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 SERPINF1P36955 418 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 CDKN1AP38936 164 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 RAD52P43351 418 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 BLVRAP53004 296 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 SNRPD2P62316 118 aaKnown RBP13.42□□□□□ -0.26
TREX1-201ENST00000433541 PPP2R2BQ00005 443 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 HGFACQ04756 655 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 RAB35Q15286 201 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 KCNMB1Q16558 191 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 LYPD4Q6UWN0 246 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 ZBTB49Q6ZSB9 765 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 ERI1Q8IV48 349 aaKnown RBP13.42□□□□□ -0.26
TREX1-201ENST00000433541 ZNF511Q8NB15 262 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 NUP37Q8NFH4 326 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 OR6N2Q8NGY6 317 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 TRMT61AQ96FX7 289 aaKnown RBP13.42□□□□□ -0.26
TREX1-201ENST00000433541 PITX2Q99697 317 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 CBLN4Q9NTU7 201 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 H2AFY2Q9P0M6 372 aaPredicted RBP13.42□□□□□ -0.26
TREX1-201ENST00000433541 FZR1Q9UM11 496 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 CMAHPQ9Y471 501 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 LHFPL6Q9Y693 200 aa13.42□□□□□ -0.26
TREX1-201ENST00000433541 H0YHG0 523 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 M0R129 80 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 GPRIN2O60269 458 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 ABHD16AO95870 558 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 DANCRP0C864 163 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 RPS27P42677 84 aaKnown RBP13.41□□□□□ -0.26
TREX1-201ENST00000433541 ENTPD1P49961 510 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 ALDH3A2P51648 485 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 SELENOVP59797 346 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 TRIP10Q15642 601 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 ZIK1Q3SY52 487 aaPredicted RBP13.41□□□□□ -0.26
TREX1-201ENST00000433541 RGS7BPQ6MZT1 257 aaPredicted RBP13.41□□□□□ -0.26
TREX1-201ENST00000433541 VASH1Q7L8A9 365 aaPredicted RBP13.41□□□□□ -0.26
TREX1-201ENST00000433541 PAQR4Q8N4S7 273 aaPredicted RBP13.41□□□□□ -0.26
TREX1-201ENST00000433541 ABHD4Q8TB40 342 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 ZMYND19Q96E35 227 aaPredicted RBP13.41□□□□□ -0.26
TREX1-201ENST00000433541 HCAR1Q9BXC0 346 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 NMNAT2Q9BZQ4 307 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 PLK3Q9H4B4 646 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 DYNLRB1Q9NP97 96 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 HINT3Q9NQE9 182 aaKnown RBP13.41□□□□□ -0.26
TREX1-201ENST00000433541 IMPAD1Q9NX62 359 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 TMEFF2Q9UIK5 374 aaPredicted RBP13.41□□□□□ -0.26
TREX1-201ENST00000433541 KCNG2Q9UJ96 466 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 GRIP1Q9Y3R0 1128 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 COMMD3-BMI1R4GMX3 469 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 PMF1-BGLAPU3KQ54 211 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 USF3Q68DE3 2245 aa13.41□□□□□ -0.26
TREX1-201ENST00000433541 LOC100509620A0A075B734 347 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 A0A1W2PPW3 197 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 ZAR1LA6NP61 321 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 TLX2O43763 284 aaPredicted RBP13.4□□□□□ -0.26
TREX1-201ENST00000433541 GLCEO94923 617 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 SNAP29O95721 258 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 ALPLP05186 524 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 EPHA2P29317 976 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 GSTT1P30711 240 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 ATP5J2P56134 94 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 CDC42P60953 191 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 APOFQ13790 326 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 TAF13Q15543 124 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 ADIPOQQ15848 244 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 LRRC36Q1X8D7 754 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 ELFN2Q5R3F8 820 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms