RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ADAM18Q9Y3Q7 739 aa7.86□□□□□ -1.15
SMC1A-203ENST00000428014 CHD3Q12873 2000 aaKnown RBP7.86□□□□□ -1.15
SMC1A-203ENST00000428014 FN1P02751 2386 aaKnown RBP7.85□□□□□ -1.15
SMC1A-203ENST00000428014 IGLV1-36A0A0B4J1U3 117 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 IGKV1D-43A0A0B4J1Z2 117 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 OR6C6A6NF89 314 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 H7C1Q1 480 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 GSC2O15499 205 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 SEC14L2O76054 403 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 UBOX5O94941 541 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 RENP00797 406 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 TACSTD2P09758 323 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 GAAP10253 952 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 CTLA4P16410 223 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 THBS2P35442 1172 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 GDI2P50395 445 aaKnown RBP7.85□□□□□ -1.15
SMC1A-203ENST00000428014 ARHGDIAP52565 204 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 SLC25A1P53007 311 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 TMEM33P57088 247 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 KLF3P57682 345 aaPredicted RBP7.85□□□□□ -1.15
SMC1A-203ENST00000428014 TUBA1BP68363 451 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 TUBA4AP68366 448 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 TEKQ02763 1124 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 FMODQ06828 376 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 PIGFQ07326 219 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 FLOT2Q14254 428 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 KRTAP27-1Q3LI81 207 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 ZNF718Q3SXZ3 478 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 CYP2R1Q6VVX0 501 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 COLCA1Q6ZS62 124 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 TUBA1AQ71U36 451 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 JAZF1Q86VZ6 243 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 C10orf67Q8IYJ2 551 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 PARP8Q8N3A8 854 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 CPEB3Q8NE35 698 aaKnown RBP7.85□□□□□ -1.15
SMC1A-203ENST00000428014 OR2T33Q8NG76 320 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 OR2T4Q8NH00 348 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 OR52J3Q8NH60 311 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 FGFBP3Q8TAT2 258 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 SYNPRQ8TBG9 265 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 C1orf159Q96HA4 380 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 ERMAPQ96PL5 475 aaPredicted RBP7.85□□□□□ -1.15
SMC1A-203ENST00000428014 THTPAQ9BU02 230 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 ZNF416Q9BWM5 594 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 NUAK2Q9H093 628 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 WNT5BQ9H1J7 359 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 SYT4Q9H2B2 425 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 SEC61A2Q9H9S3 476 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 ARMC1Q9NVT9 282 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 ENOPH1Q9UHY7 261 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 KLHL21Q9UJP4 597 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 ZDHHC8Q9ULC8 765 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 POMPQ9Y244 141 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 SAMHD1Q9Y3Z3 626 aaKnown RBP7.85□□□□□ -1.15
SMC1A-203ENST00000428014 IER3IP1Q9Y5U9 82 aa7.85□□□□□ -1.15
SMC1A-203ENST00000428014 A0A1B0GWJ7 208 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 IFNL4K9M1U5 179 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 EBAG9O00559 213 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 SGCEO43556 437 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 RRP9O43818 475 aaKnown RBP7.84□□□□□ -1.15
SMC1A-203ENST00000428014 CD5LO43866 347 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 SLC16A7O60669 478 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 DEAF1O75398 565 aaPredicted RBP7.84□□□□□ -1.15
SMC1A-203ENST00000428014 DIRAS1O95057 198 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 CST1P01037 141 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 IFNGP01579 166 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 CD55P08174 381 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 FCGR1AP12314 374 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 KITLGP21583 273 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 ACHEP22303 614 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 NOS3P29474 1203 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 OTX1P32242 354 aaPredicted RBP7.84□□□□□ -1.15
SMC1A-203ENST00000428014 MSX2P35548 267 aaPredicted RBP7.84□□□□□ -1.15
SMC1A-203ENST00000428014 CDKN2AP42771 156 aaKnown RBP7.84□□□□□ -1.15
SMC1A-203ENST00000428014 NR4A2P43354 598 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 MYBPC1Q00872 1141 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 TOP3AQ13472 1001 aaPredicted RBP7.84□□□□□ -1.15
SMC1A-203ENST00000428014 SGCAQ16586 387 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 ZNF362Q5T0B9 420 aaPredicted RBP7.84□□□□□ -1.15
SMC1A-203ENST00000428014 CLEC9AQ6UXN8 241 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 PTCHD4Q6ZW05 846 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 SLC26A10Q8NG04 563 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 OR5L1Q8NGL2 311 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 SNX33Q8WV41 574 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 CANT1Q8WVQ1 401 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 RASD2Q96D21 266 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 MARS2Q96GW9 593 aaKnown RBP7.84□□□□□ -1.15
SMC1A-203ENST00000428014 SORCS2Q96PQ0 1159 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 PIMREGQ9BSJ6 248 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 IFT27Q9BW83 186 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 MRPL37Q9BZE1 423 aaKnown RBP7.84□□□□□ -1.15
SMC1A-203ENST00000428014 NMNAT2Q9BZQ4 307 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 CHODLQ9H9P2 273 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 CMC2Q9NRP2 79 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 DNAJB9Q9UBS3 223 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 REV1Q9UBZ9 1251 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 CYB5R1Q9UHQ9 305 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 B9D1Q9UPM9 204 aa7.84□□□□□ -1.15
SMC1A-203ENST00000428014 YLPM1P49750 1951 aaKnown RBP7.83□□□□□ -1.16
SMC1A-203ENST00000428014 LOC100509620A0A075B734 347 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms