RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 TRAV20A0A0B4J274 112 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 TRBV4-1A0A0J9YWV2 114 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 PRSS37A4D1T9 235 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 PTP4A3O75365 173 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 DIRAS1O95057 198 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 COX5BP10606 129 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 SDHAP31040 664 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 MMP15P51511 669 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 GYS2P54840 703 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 PPP1CBP62140 327 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 SCGB2A2Q13296 93 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 KRR1Q13601 381 aaKnown RBP21.56■■□□□ 1.04
VEGFA-208ENST00000417285 ENDOGQ14249 297 aaKnown RBP21.56■■□□□ 1.04
VEGFA-208ENST00000417285 TSTQ16762 297 aaKnown RBP21.56■■□□□ 1.04
VEGFA-208ENST00000417285 SPATA46Q5T0L3 261 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 ACSM5Q6NUN0 579 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 USP51Q70EK9 711 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 TEX29Q8N6K0 151 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 OR52J3Q8NH60 311 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 ABHD4Q8TB40 342 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 RAB1CQ92928 201 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 MCUR1Q96AQ8 359 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 ELMOD3Q96FG2 381 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 DIRC2Q96SL1 478 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 GPX7Q96SL4 187 aaPredicted RBP21.56■■□□□ 1.04
VEGFA-208ENST00000417285 OR2J1Q9GZK6 312 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 EGLN1Q9GZT9 426 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 NDE1Q9NXR1 346 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 ZDHHC8Q9ULC8 765 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 V9GYQ6 96 aa21.56■■□□□ 1.04
VEGFA-208ENST00000417285 NBEAL1Q6ZS30 2694 aa21.55■■□□□ 1.04
VEGFA-208ENST00000417285 TEX13CA0A0J9YWL9 993 aa21.55■■□□□ 1.04
VEGFA-208ENST00000417285 CLDN25C9JDP6 229 aa21.55■■□□□ 1.04
VEGFA-208ENST00000417285 ADH4P08319 380 aa21.55■■□□□ 1.04
VEGFA-208ENST00000417285 MVKQ03426 396 aa21.55■■□□□ 1.04
VEGFA-208ENST00000417285 GLO1Q04760 184 aa21.55■■□□□ 1.04
VEGFA-208ENST00000417285 ZMAT1Q5H9K5 638 aa21.55■■□□□ 1.04
VEGFA-208ENST00000417285 ZNF774Q6NX45 483 aa21.55■■□□□ 1.04
VEGFA-208ENST00000417285 C16orf89Q6UX73 402 aa21.55■■□□□ 1.04
VEGFA-208ENST00000417285 RINLQ6ZS11 566 aa21.55■■□□□ 1.04
VEGFA-208ENST00000417285 PIGWQ7Z7B1 504 aa21.55■■□□□ 1.04
VEGFA-208ENST00000417285 ZER1Q7Z7L7 766 aa21.55■■□□□ 1.04
VEGFA-208ENST00000417285 IPCEF1Q8WWN9 437 aaPredicted RBP21.55■■□□□ 1.04
VEGFA-208ENST00000417285 NSMCE2Q96MF7 247 aa21.55■■□□□ 1.04
VEGFA-208ENST00000417285 CDRT15Q96T59 188 aa21.55■■□□□ 1.04
VEGFA-208ENST00000417285 NRIP3Q9NQ35 241 aa21.55■■□□□ 1.04
VEGFA-208ENST00000417285 KLHL21Q9UJP4 597 aa21.55■■□□□ 1.04
VEGFA-208ENST00000417285 UNC119BA6NIH7 251 aa21.54■■□□□ 1.04
VEGFA-208ENST00000417285 IGHV1-46P01743 117 aa21.54■■□□□ 1.04
VEGFA-208ENST00000417285 MPV17P39210 176 aa21.54■■□□□ 1.04
VEGFA-208ENST00000417285 SLC3A1Q07837 685 aa21.54■■□□□ 1.04
VEGFA-208ENST00000417285 SCRN3Q0VDG4 424 aa21.54■■□□□ 1.04
VEGFA-208ENST00000417285 SEC23BQ15437 767 aa21.54■■□□□ 1.04
VEGFA-208ENST00000417285 RASD2Q96D21 266 aa21.54■■□□□ 1.04
VEGFA-208ENST00000417285 RAB39BQ96DA2 213 aa21.54■■□□□ 1.04
VEGFA-208ENST00000417285 ZNF665Q9H7R5 613 aa21.54■■□□□ 1.04
VEGFA-208ENST00000417285 LPAR2Q9HBW0 351 aa21.54■■□□□ 1.04
VEGFA-208ENST00000417285 ARL8BQ9NVJ2 186 aa21.54■■□□□ 1.04
VEGFA-208ENST00000417285 CD300AQ9UGN4 299 aa21.54■■□□□ 1.04
VEGFA-208ENST00000417285 A0A0A6YYJ9 748 aa21.53■■□□□ 1.04
VEGFA-208ENST00000417285 ARPC2O15144 300 aa21.53■■□□□ 1.04
VEGFA-208ENST00000417285 SPRY3O43610 288 aa21.53■■□□□ 1.04
VEGFA-208ENST00000417285 GADD45GO95257 159 aa21.53■■□□□ 1.04
VEGFA-208ENST00000417285 NGFP01138 241 aa21.53■■□□□ 1.04
VEGFA-208ENST00000417285 SEMG1P04279 462 aa21.53■■□□□ 1.04
VEGFA-208ENST00000417285 RPS6KA3P51812 740 aa21.53■■□□□ 1.04
VEGFA-208ENST00000417285 MXRA7P84157 204 aa21.53■■□□□ 1.04
VEGFA-208ENST00000417285 SPIBQ01892 262 aa21.53■■□□□ 1.04
VEGFA-208ENST00000417285 THSD4Q6ZMP0 1018 aa21.53■■□□□ 1.04
VEGFA-208ENST00000417285 DPY19L2P2Q6ZN68 376 aa21.53■■□□□ 1.04
VEGFA-208ENST00000417285 ADCK1Q86TW2 530 aa21.53■■□□□ 1.04
VEGFA-208ENST00000417285 GTF3AQ92664 365 aaKnown RBP21.53■■□□□ 1.04
VEGFA-208ENST00000417285 FUZQ9BT04 418 aa21.53■■□□□ 1.04
VEGFA-208ENST00000417285 EMC7Q9NPA0 242 aa21.53■■□□□ 1.04
VEGFA-208ENST00000417285 TBCCD1Q9NVR7 557 aa21.53■■□□□ 1.04
VEGFA-208ENST00000417285 KHDRBS3O75525 346 aaKnown RBP21.52■■□□□ 1.04
VEGFA-208ENST00000417285 SCG5P05408 212 aa21.52■■□□□ 1.04
VEGFA-208ENST00000417285 CTLA4P16410 223 aa21.52■■□□□ 1.04
VEGFA-208ENST00000417285 SPATS1Q496A3 300 aa21.52■■□□□ 1.04
VEGFA-208ENST00000417285 AVPI1Q5T686 147 aa21.52■■□□□ 1.04
VEGFA-208ENST00000417285 FAHD2BQ6P2I3 314 aaPredicted RBP21.52■■□□□ 1.04
VEGFA-208ENST00000417285 SMARCD3Q6STE5 483 aa21.52■■□□□ 1.04
VEGFA-208ENST00000417285 RFPL4BQ6ZWI9 263 aa21.52■■□□□ 1.04
VEGFA-208ENST00000417285 FAHD2AQ96GK7 314 aa21.52■■□□□ 1.04
VEGFA-208ENST00000417285 SYT4Q9H2B2 425 aa21.52■■□□□ 1.04
VEGFA-208ENST00000417285 VSX1Q9NZR4 365 aaPredicted RBP21.52■■□□□ 1.04
VEGFA-208ENST00000417285 IL20RAQ9UHF4 553 aa21.52■■□□□ 1.04
VEGFA-208ENST00000417285 WIPI2Q9Y4P8 454 aa21.52■■□□□ 1.04
VEGFA-208ENST00000417285 IER3IP1Q9Y5U9 82 aa21.52■■□□□ 1.04
VEGFA-208ENST00000417285 SOCS2O14508 198 aa21.51■■□□□ 1.03
VEGFA-208ENST00000417285 DOK2O60496 412 aa21.51■■□□□ 1.03
VEGFA-208ENST00000417285 SLC16A7O60669 478 aa21.51■■□□□ 1.03
VEGFA-208ENST00000417285 FABP3P05413 133 aa21.51■■□□□ 1.03
VEGFA-208ENST00000417285 GSTM3P21266 225 aa21.51■■□□□ 1.03
VEGFA-208ENST00000417285 MSX2P35548 267 aaPredicted RBP21.51■■□□□ 1.03
VEGFA-208ENST00000417285 SRSF2Q01130 221 aaKnown RBP21.51■■□□□ 1.03
VEGFA-208ENST00000417285 SHQ1Q6PI26 577 aaKnown RBP21.51■■□□□ 1.03
VEGFA-208ENST00000417285 GLB1L2Q8IW92 636 aa21.51■■□□□ 1.03
VEGFA-208ENST00000417285 DEFB107AQ8IZN7 70 aa21.51■■□□□ 1.03
VEGFA-208ENST00000417285 NPEPL1Q8NDH3 523 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms