RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 KRCC1Q9NPI7 259 aaPredicted RBP14.96□□□□□ -0.01
PDLIM2-208ENST00000416159 TUBG2Q9NRH3 451 aa14.96□□□□□ -0.01
PDLIM2-208ENST00000416159 DCAF13Q9NV06 445 aaKnown RBP14.96□□□□□ -0.01
PDLIM2-208ENST00000416159 NDUFAF4Q9P032 175 aa14.96□□□□□ -0.01
PDLIM2-208ENST00000416159 EGFL7Q9UHF1 273 aa14.96□□□□□ -0.01
PDLIM2-208ENST00000416159 SAMD4AQ9UPU9 718 aaKnown RBP14.96□□□□□ -0.01
PDLIM2-208ENST00000416159 TRAV20A0A0B4J274 112 aa14.95□□□□□ -0.02
PDLIM2-208ENST00000416159 TEX13CA0A0J9YWL9 993 aa14.95□□□□□ -0.02
PDLIM2-208ENST00000416159 ATP8B1O43520 1251 aa14.95□□□□□ -0.02
PDLIM2-208ENST00000416159 SDHAP31040 664 aa14.95□□□□□ -0.02
PDLIM2-208ENST00000416159 SLC3A1Q07837 685 aa14.95□□□□□ -0.02
PDLIM2-208ENST00000416159 ZMAT1Q5H9K5 638 aa14.95□□□□□ -0.02
PDLIM2-208ENST00000416159 RAB39BQ96DA2 213 aa14.95□□□□□ -0.02
PDLIM2-208ENST00000416159 GPX7Q96SL4 187 aaPredicted RBP14.95□□□□□ -0.02
PDLIM2-208ENST00000416159 EMC7Q9NPA0 242 aa14.95□□□□□ -0.02
PDLIM2-208ENST00000416159 NRIP3Q9NQ35 241 aa14.95□□□□□ -0.02
PDLIM2-208ENST00000416159 TBCCD1Q9NVR7 557 aa14.95□□□□□ -0.02
PDLIM2-208ENST00000416159 KLHL21Q9UJP4 597 aa14.95□□□□□ -0.02
PDLIM2-208ENST00000416159 ZDHHC8Q9ULC8 765 aa14.95□□□□□ -0.02
PDLIM2-208ENST00000416159 AURKCQ9UQB9 309 aa14.95□□□□□ -0.02
PDLIM2-208ENST00000416159 SIGLEC7Q9Y286 467 aa14.95□□□□□ -0.02
PDLIM2-208ENST00000416159 WIPI2Q9Y4P8 454 aa14.95□□□□□ -0.02
PDLIM2-208ENST00000416159 SGCEO43556 437 aa14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 DOK2O60496 412 aa14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 KHDRBS3O75525 346 aaKnown RBP14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 ABHD16AO95870 558 aa14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 CTLA4P16410 223 aa14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 GSTM3P21266 225 aa14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 OMPP47874 163 aa14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 LIMS1P48059 325 aa14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 SCGB2A2Q13296 93 aa14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 KRR1Q13601 381 aaKnown RBP14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 KRT72Q14CN4 511 aa14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 MTX3Q5HYI7 312 aa14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 TMEM255AQ5JRV8 349 aa14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 FGD3Q5JSP0 725 aa14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 TEX29Q8N6K0 151 aa14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 NPEPL1Q8NDH3 523 aa14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 C7orf34Q96L11 122 aa14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 ADA2Q9NZK5 511 aa14.94□□□□□ -0.02
PDLIM2-208ENST00000416159 WNK2Q9Y3S1 2297 aa14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 ZSCAN5BA6NJL1 495 aa14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 TIMM8AO60220 97 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 SLC16A7O60669 478 aa14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 CD55P08174 381 aa14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 ITGA2P17301 1181 aa14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 HTR5AP47898 357 aa14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 LSM6P62312 80 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 AQP6Q13520 282 aa14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 SHQ1Q6PI26 577 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 DPY19L2P2Q6ZN68 376 aa14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 CCL17Q92583 94 aa14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 RASD2Q96D21 266 aa14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 RSRC1Q96IZ7 334 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 COG8Q96MW5 612 aa14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 SYT4Q9H2B2 425 aa14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 METTL17Q9H7H0 456 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 GORASP2Q9H8Y8 452 aa14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 PLEK2Q9NYT0 353 aa14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 VSX1Q9NZR4 365 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 COA3Q9Y2R0 106 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 IER3IP1Q9Y5U9 82 aa14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 CACNG2Q9Y698 323 aa14.93□□□□□ -0.02
PDLIM2-208ENST00000416159 A0A0A6YYJ9 748 aa14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 TRBV4-1A0A0J9YWV2 114 aa14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 UNC119BA6NIH7 251 aa14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 DEAF1O75398 565 aaPredicted RBP14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 UBOX5O94941 541 aa14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 MPZL1O95297 269 aa14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 TXNDC12O95881 172 aa14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 IGHV2-5P01817 119 aa14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 RPS6KA3P51812 740 aa14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 SMIM11AP58511 58 aa14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 PSG7Q13046 419 aa14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 FAHD2BQ6P2I3 314 aaPredicted RBP14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 VASH1Q7L8A9 365 aaPredicted RBP14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 PEG10Q86TG7 708 aaKnown RBP14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 ADCK1Q86TW2 530 aa14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 GLB1L2Q8IW92 636 aa14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 FAHD2AQ96GK7 314 aa14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 DHRS1Q96LJ7 313 aa14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 NSRP1Q9H0G5 558 aaKnown RBP14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 OCEL1Q9H607 264 aa14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 RERGLQ9H628 205 aa14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 MSL2Q9HCI7 577 aa14.92□□□□□ -0.02
PDLIM2-208ENST00000416159 SOCS2O14508 198 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 PLPP2O43688 288 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 SNX3O60493 162 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 DIRAS1O95057 198 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 PNPP00491 289 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 KITLGP21583 273 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 TNFAIP6P98066 277 aaPredicted RBP14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 CDK5R2Q13319 367 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 SEC23BQ15437 767 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 SMARCD3Q6STE5 483 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 THSD4Q6ZMP0 1018 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 RNF148Q8N7C7 305 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 OR52J3Q8NH60 311 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 PTP4A1Q93096 173 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 CMBLQ96DG6 245 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms