RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 OR4C45A6NMZ5 311 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 ZNF879B4DU55 563 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 GPR171O14626 319 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 ZNF254O75437 659 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 SC5DO75845 299 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 GATBO75879 557 aaKnown RBP7.64□□□□□ -1.19
TDP1-203ENST00000393454 ARL6IP5O75915 188 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 OCM2P0CE71 109 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 EIF2S3P41091 472 aaKnown RBP7.64□□□□□ -1.19
TDP1-203ENST00000393454 KIR3DL2P43630 455 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 SOX2P48431 317 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 MFGE8Q08431 387 aaPredicted RBP7.64□□□□□ -1.19
TDP1-203ENST00000393454 ZNF169Q14929 603 aaPredicted RBP7.64□□□□□ -1.19
TDP1-203ENST00000393454 KCNMB1Q16558 191 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 HSD17B12Q53GQ0 312 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 WDR38Q5JTN6 314 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 CFAP77Q6ZQR2 320 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 SPACA3Q8IXA5 215 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 TUSC5Q8IXB3 177 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 RPS4Y2Q8TD47 263 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 RNF133Q8WVZ7 376 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 AP3S1Q92572 193 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 BORCS5Q969J3 196 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 PPP1R14AQ96A00 147 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 WDYHV1Q96HA8 205 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 C4orf45Q96LM5 186 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 ZNF416Q9BWM5 594 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 NELFAQ9H3P2 528 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 CRLF2Q9HC73 371 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 NOX4Q9NPH5 578 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 AKIP1Q9NQ31 210 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 PLEKHB1Q9UF11 243 aaPredicted RBP7.64□□□□□ -1.19
TDP1-203ENST00000393454 SLC22A13Q9Y226 551 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 R4GMQ9 66 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 APC2O95996 2303 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 TMEM269A0A1B0GVZ9 245 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 LOC110117498-PIK3R3F6TDL0 507 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 RER1O15258 196 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 DOK2O60496 412 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 PNPP00491 289 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 IGHV3-9P01782 118 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 HSD11B1P28845 292 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 LSM6P62312 80 aaKnown RBP7.63□□□□□ -1.19
TDP1-203ENST00000393454 Q499Y3 187 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 IDNKQ5T6J7 187 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 FDX2Q6P4F2 183 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 DEGS2Q6QHC5 323 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 TPRA1Q86W33 373 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 TEX19Q8NA77 164 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 TSEN15Q8WW01 171 aaKnown RBP7.63□□□□□ -1.19
TDP1-203ENST00000393454 RGP1Q92546 391 aaPredicted RBP7.63□□□□□ -1.19
TDP1-203ENST00000393454 ORAI1Q96D31 301 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 ZNF837Q96EG3 531 aaPredicted RBP7.63□□□□□ -1.19
TDP1-203ENST00000393454 ALKBH3Q96Q83 286 aaPredicted RBP7.63□□□□□ -1.19
TDP1-203ENST00000393454 PARPBPQ9NWS1 579 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 COMMD3Q9UBI1 195 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 CMAHPQ9Y471 501 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 N6AMT1Q9Y5N5 214 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 IGKV3D-15A0A087WSY6 115 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 IQCMA0A1B0GVH7 501 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 ZNF878C9JN71 531 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 RRP8O43159 456 aaKnown RBP7.63□□□□□ -1.19
TDP1-203ENST00000393454 UCHL1P09936 223 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 CPN1P15169 458 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 RAB3BP20337 219 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 CCR9P51686 369 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 ZNF133P52736 654 aaPredicted RBP7.63□□□□□ -1.19
TDP1-203ENST00000393454 OR10A3P58181 314 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 RNPS1Q15287 305 aaKnown RBP7.63□□□□□ -1.19
TDP1-203ENST00000393454 SPANXN2Q5MJ10 180 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 UNQ9370/PRO34162Q6UXP9 181 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 P4HA3Q7Z4N8 544 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 SYT9Q86SS6 491 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 CATSPERDQ86XM0 798 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 MFSD4AQ8N468 514 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 OR10S1Q8NGN2 331 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 OR10AC1Q8NH08 325 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 GPR148Q8TDV2 347 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 TMEM45BQ96B21 275 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 DERL3Q96Q80 235 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 SLC25A18Q9H1K4 315 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 OR52A1Q9UKL2 312 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 WASF3Q9UPY6 502 aa7.63□□□□□ -1.19
TDP1-203ENST00000393454 PCDHGA9Q9Y5G4 932 aaKnown RBP7.63□□□□□ -1.19
TDP1-203ENST00000393454 ACACAQ13085 2346 aa7.62□□□□□ -1.19
TDP1-203ENST00000393454 PRRC2CQ9Y520 2896 aaKnown RBP7.62□□□□□ -1.19
TDP1-203ENST00000393454 TRAV1-2A0A0B4J238 106 aa7.62□□□□□ -1.19
TDP1-203ENST00000393454 SLC22A20A6NK97 555 aa7.62□□□□□ -1.19
TDP1-203ENST00000393454 MKRN2OSH3BPM6 223 aa7.62□□□□□ -1.19
TDP1-203ENST00000393454 ZNHIT1O43257 154 aa7.62□□□□□ -1.19
TDP1-203ENST00000393454 YES1P07947 543 aa7.62□□□□□ -1.19
TDP1-203ENST00000393454 SRMP19623 302 aa7.62□□□□□ -1.19
TDP1-203ENST00000393454 MAPK3P27361 379 aaPredicted RBP7.62□□□□□ -1.19
TDP1-203ENST00000393454 TNFSF8P32971 234 aa7.62□□□□□ -1.19
TDP1-203ENST00000393454 PRKXP51817 358 aa7.62□□□□□ -1.19
TDP1-203ENST00000393454 GALK2Q01415 458 aa7.62□□□□□ -1.19
TDP1-203ENST00000393454 CEACAM16Q2WEN9 425 aa7.62□□□□□ -1.19
TDP1-203ENST00000393454 BCL2L15Q5TBC7 163 aa7.62□□□□□ -1.19
TDP1-203ENST00000393454 MZT2AQ6P582 158 aa7.62□□□□□ -1.19
TDP1-203ENST00000393454 IGFL3Q6UXB1 125 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms