RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 UNQ9370/PRO34162Q6UXP9 181 aa12.34□□□□□ -0.43
SHC1-202ENST00000368445 ABHD12BQ7Z5M8 362 aaPredicted RBP12.34□□□□□ -0.43
SHC1-202ENST00000368445 NPRL2Q8WTW4 380 aa12.34□□□□□ -0.43
SHC1-202ENST00000368445 FAM3DQ96BQ1 224 aa12.34□□□□□ -0.43
SHC1-202ENST00000368445 UCN2Q96RP3 112 aa12.34□□□□□ -0.43
SHC1-202ENST00000368445 KCNJ15Q99712 375 aa12.34□□□□□ -0.43
SHC1-202ENST00000368445 PLEKHA1Q9HB21 404 aa12.34□□□□□ -0.43
SHC1-202ENST00000368445 ELL3Q9HB65 397 aaPredicted RBP12.34□□□□□ -0.43
SHC1-202ENST00000368445 VSX1Q9NZR4 365 aaPredicted RBP12.34□□□□□ -0.43
SHC1-202ENST00000368445 LOC100509620A0A075B734 347 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 LNP1A1A4G5 178 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 RER1O15258 196 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 ZNF208O43345 1280 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 LMX1BO60663 402 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 EIF1P41567 113 aaKnown RBP12.33□□□□□ -0.44
SHC1-202ENST00000368445 PCGF3Q3KNV8 242 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 C2orf76Q3KRA6 126 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 C6orf15Q6UXA7 325 aaPredicted RBP12.33□□□□□ -0.44
SHC1-202ENST00000368445 ZNF454Q8N9F8 522 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 OR13C9Q8NGT0 318 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 POTEKPQ9BYX7 375 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 STEAP1Q9UHE8 339 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 A0A1B0GVI7 797 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 COX6A1P12074 109 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 ITGA3P26006 1051 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 DCTDP32321 178 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 DDOSTP39656 456 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 EFNB2P52799 333 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 CLDN20P56880 219 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 FCN2Q15485 313 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 STPG1Q5TH74 334 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 ZNF101Q8IZC7 436 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 ELP5Q8TE02 316 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 DVL3Q92997 716 aaPredicted RBP12.33□□□□□ -0.44
SHC1-202ENST00000368445 WDR54Q9H977 334 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 MOV10Q9HCE1 1003 aaKnown RBP12.33□□□□□ -0.44
SHC1-202ENST00000368445 HSPB11Q9Y547 144 aa12.33□□□□□ -0.44
SHC1-202ENST00000368445 PCDHGA9Q9Y5G4 932 aaKnown RBP12.33□□□□□ -0.44
SHC1-202ENST00000368445 CHCHD2Q9Y6H1 151 aaPredicted RBP12.33□□□□□ -0.44
SHC1-202ENST00000368445 A0A0A6YYJ9 748 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 LOC101059948A0A1B0GTJ6 334 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 OR2M5A3KFT3 312 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 TNFSF11O14788 317 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 SMAD9O15198 467 aaKnown RBP12.32□□□□□ -0.44
SHC1-202ENST00000368445 ZNF254O75437 659 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 YES1P07947 543 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 ZNF20P17024 532 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 ENPP1P22413 925 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 LAP3P28838 519 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 HOXD12P35452 270 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 MMP15P51511 669 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 AP3S2P59780 193 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 GUCA2AQ02747 115 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 TRA2AQ13595 282 aaKnown RBP eCLIP12.32□□□□□ -0.44
SHC1-202ENST00000368445 NAXEQ8NCW5 288 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 SFXN2Q96NB2 322 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 EML6Q6ZMW3 1958 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 GMDSO60547 372 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 ITGA5P08648 1049 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 GTF2F2P13984 249 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 SLC6A1P30531 599 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 TAS2R20P59543 309 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 ANGPT1Q15389 498 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 LINC00696Q6ZRV3 163 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 TMPPEQ6ZT21 453 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 NOXA1Q86UR1 476 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 IL22RA1Q8N6P7 574 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 OR51E1Q8TCB6 317 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 HAVCR2Q8TDQ0 301 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 TRIM63Q969Q1 353 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 SLC25A38Q96DW6 304 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 KCNK17Q96T54 332 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 TCFL5Q9UL49 500 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 FARSAQ9Y285 508 aaKnown RBP12.32□□□□□ -0.44
SHC1-202ENST00000368445 ARPC1BO15143 372 aaKnown RBP12.32□□□□□ -0.44
SHC1-202ENST00000368445 RAF1P04049 648 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 CSNK1A1P48729 337 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 SLC35A1P78382 337 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 MAB21L1Q13394 359 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 ZNF782Q6ZMW2 699 aaPredicted RBP12.32□□□□□ -0.44
SHC1-202ENST00000368445 BMPERQ8N8U9 685 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 DUSP18Q8NEJ0 188 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 CREB3L1Q96BA8 519 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 MARVELD1Q9BSK0 173 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 GDF2Q9UK05 429 aaPredicted RBP12.32□□□□□ -0.44
SHC1-202ENST00000368445 R4GMQ9 66 aa12.32□□□□□ -0.44
SHC1-202ENST00000368445 NTN3O00634 580 aaPredicted RBP12.31□□□□□ -0.44
SHC1-202ENST00000368445 RAB40ALP0C0E4 278 aa12.31□□□□□ -0.44
SHC1-202ENST00000368445 STOMP27105 288 aa12.31□□□□□ -0.44
SHC1-202ENST00000368445 HTR2CP28335 458 aa12.31□□□□□ -0.44
SHC1-202ENST00000368445 RRAS2P62070 204 aaPredicted RBP12.31□□□□□ -0.44
SHC1-202ENST00000368445 ZFP36L1Q07352 338 aaKnown RBP12.31□□□□□ -0.44
SHC1-202ENST00000368445 ZNF704Q6ZNC4 412 aaPredicted RBP12.31□□□□□ -0.44
SHC1-202ENST00000368445 FAM57BQ71RH2 274 aa12.31□□□□□ -0.44
SHC1-202ENST00000368445 MEIOBQ8N635 442 aa12.31□□□□□ -0.44
SHC1-202ENST00000368445 ACBD4Q8NC06 268 aa12.31□□□□□ -0.44
SHC1-202ENST00000368445 SMIM4Q8WVI0 70 aa12.31□□□□□ -0.44
SHC1-202ENST00000368445 GIMAP1Q8WWP7 306 aa12.31□□□□□ -0.44
SHC1-202ENST00000368445 ASB5Q8WWX0 329 aa12.31□□□□□ -0.44
SHC1-202ENST00000368445 RAB40AQ8WXH6 277 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms