RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 KCNE3Q9Y6H6 103 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 IGHV3-64DA0A0J9YX35 117 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 A0A1W2PRD5 423 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 TMEM120BA0PK00 339 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 LSM8O95777 96 aaKnown RBP3.28□□□□□ -1.88
RPL39-201ENST00000361575 TGM6O95932 706 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 ZDHHC11BP0C7U3 371 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 NR2C1P13056 603 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 GGT1P19440 569 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 RAB4AP20338 218 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 RFC3P40938 356 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 CXCL5P42830 114 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 NMUP48645 174 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 CSNK1DP48730 415 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 SERPINB8P50452 374 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 ZNF136P52737 540 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 ATP6V0D1P61421 351 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 SEMG2Q02383 582 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 POU2AF1Q16633 256 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 TMEM183BQ1AE95 376 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 PTPN20Q4JDL3 420 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 GPR107Q5VW38 600 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 C12orf54Q6X4T0 127 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 CAMK2N1Q7Z7J9 78 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 TMEM183AQ8IXX5 376 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 PDCL2Q8N4E4 241 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 LINC01555Q8NAE3 123 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 OR10AD1Q8NGE0 317 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 OR4S2Q8NH73 311 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 OR6X1Q8NH79 312 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 LKAAEAR1Q8TD35 194 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 CD300LFQ8TDQ1 290 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 APH1AQ96BI3 265 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 DNAJC1Q96KC8 554 aaKnown RBP3.28□□□□□ -1.88
RPL39-201ENST00000361575 C9orf72Q96LT7 481 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 FOXC2Q99958 501 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 CDC42EP4Q9H3Q1 356 aaKnown RBP3.28□□□□□ -1.88
RPL39-201ENST00000361575 CLSTN2Q9H4D0 955 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 NANOGQ9H9S0 305 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 PDFQ9HBH1 243 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 NEU3Q9UQ49 428 aa3.28□□□□□ -1.88
RPL39-201ENST00000361575 LOC100653049A0A140TA62 436 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 A0A1B0GUH1 482 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 A0A1B0GVY2 172 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 A0A1W2PPV4 95 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 TSPAN11A1L157 253 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 ERI3O43414 337 aaKnown RBP3.27□□□□□ -1.89
RPL39-201ENST00000361575 SS18L1O75177 396 aaPredicted RBP3.27□□□□□ -1.89
RPL39-201ENST00000361575 KRT34O76011 436 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 CSTAP01040 98 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 KRT16P08779 473 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 TACSTD2P09758 323 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 ATF6P18850 670 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 RPS10P46783 165 aaKnown RBP3.27□□□□□ -1.89
RPL39-201ENST00000361575 PRR3P79522 188 aaKnown RBP3.27□□□□□ -1.89
RPL39-201ENST00000361575 LCN2P80188 198 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 SMARCB1Q12824 385 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 RCAN2Q14206 197 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 PIGGQ5H8A4 983 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 NPSR1Q6W5P4 371 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 FBXW12Q6X9E4 464 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 LINC00336Q6ZUF6 198 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 NCCRP1Q6ZVX7 275 aaPredicted RBP3.27□□□□□ -1.89
RPL39-201ENST00000361575 H2AFVQ71UI9 128 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 OAFQ86UD1 273 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 NPWQ8N729 165 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 INO80EQ8NBZ0 244 aaPredicted RBP3.27□□□□□ -1.89
RPL39-201ENST00000361575 CCDC54Q8NEL0 328 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 OR5AR1Q8NGP9 310 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 RAB1CQ92928 201 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 ZNF317Q96PQ6 595 aaPredicted RBP3.27□□□□□ -1.89
RPL39-201ENST00000361575 CSPG4P5Q96PW8 444 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 MICU1Q9BPX6 476 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 ABCB10Q9NRK6 738 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 SAR1BQ9Y6B6 198 aa3.27□□□□□ -1.89
RPL39-201ENST00000361575 MAP3K15Q6ZN16 1313 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 ADGRA3Q8IWK6 1321 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 CYSRT1A8MQ03 144 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 GABRPO00591 440 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 NME4O00746 187 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 PCCAP05165 728 aaPredicted RBP3.26□□□□□ -1.89
RPL39-201ENST00000361575 EIF4EP06730 217 aaKnown RBP3.26□□□□□ -1.89
RPL39-201ENST00000361575 GABRG2P18507 467 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 CDKN2BP42772 138 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 WNT4P56705 351 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 XIAPP98170 497 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 TSC22D1Q15714 1073 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 MBOAT2Q6ZWT7 520 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 TRAM1L1Q8N609 369 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 OR52E2Q8NGJ4 325 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 OR4A15Q8NGL6 344 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 BLOC1S5Q8TDH9 187 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 RPEQ96AT9 228 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 ELSPBP1Q96BH3 223 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 DYNLL2Q96FJ2 89 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 HDHD3Q9BSH5 251 aaPredicted RBP3.26□□□□□ -1.89
RPL39-201ENST00000361575 CHAC1Q9BUX1 264 aa3.26□□□□□ -1.89
RPL39-201ENST00000361575 NAA50Q9GZZ1 169 aaKnown RBP3.26□□□□□ -1.89
RPL39-201ENST00000361575 ZMAT5Q9UDW3 170 aaKnown RBP3.26□□□□□ -1.89
RPL39-201ENST00000361575 CACNG2Q9Y698 323 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms