RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 MMP15P51511 669 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 OR8G1Q15617 311 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 VITQ6UXI7 678 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 SCD5Q86SK9 330 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 NRSN1Q8IZ57 195 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF687Q8N1G0 1237 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 OR5M9Q8NGP3 310 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 EDAQ92838 391 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 MRPL38Q96DV4 380 aaKnown RBP5.57□□□□□ -1.52
VPS13B-203ENST00000358544 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.57□□□□□ -1.52
VPS13B-203ENST00000358544 TAS2R4Q9NYW5 299 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 METTL1Q9UBP6 276 aaKnown RBP5.57□□□□□ -1.52
VPS13B-203ENST00000358544 OR5V1Q9UGF6 321 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 LILRB3O75022 631 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 OPN1MWP04001 364 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 OPN1MW2P0DN77 364 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 OPN1MW3P0DN78 364 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 GABRA1P14867 456 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 NTF3P20783 257 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 GALP22466 123 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 MPGP29372 298 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 SLC11A1P49279 550 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 GUCA2BQ16661 112 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 ARSIQ5FYB1 569 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 RAB9BQ9NP90 201 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 E5RGE8 158 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 CLDN1O95832 211 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 ADH1BP00325 375 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 LAG3P18627 525 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 HIST1H1TP22492 207 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-203ENST00000358544 FAM57BQ71RH2 274 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 C1orf198Q9H425 327 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 ADARB2Q9NS39 739 aaKnown RBP5.57□□□□□ -1.52
VPS13B-203ENST00000358544 SIRT3Q9NTG7 399 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-203ENST00000358544 OPN4Q9UHM6 478 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 NSG2Q9Y328 171 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 EML6Q6ZMW3 1958 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 GNB3P16520 340 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 DPP4P27487 766 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 HOXC12P31275 282 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 ARRB1P49407 418 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-203ENST00000358544 EFNA3P52797 238 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 ERVK-16P61578 105 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 SLC17A1Q14916 467 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 SLCO4C1Q6ZQN7 724 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 TRMT61AQ96FX7 289 aaKnown RBP5.57□□□□□ -1.52
VPS13B-203ENST00000358544 TREM2Q9NZC2 230 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 NUP188Q5SRE5 1749 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 COCHO43405 550 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 TRAF3IP2O43734 574 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-203ENST00000358544 LIMS3P0CW19 117 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 LIMS4P0CW20 117 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 THBS2P35442 1172 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 PMS2P11Q13670 270 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 PABPC1L2AQ5JQF8 200 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 FAM162BQ5T6X4 162 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 LCN15Q6UWW0 184 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 EXD3Q8N9H8 876 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 EMG1Q92979 244 aaKnown RBP5.57□□□□□ -1.52
VPS13B-203ENST00000358544 METTL9Q9H1A3 318 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF331Q9NQX6 463 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-203ENST00000358544 SLC17A5Q9NRA2 495 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 BET1LQ9NYM9 111 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 C7orf66A4D0T2 115 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 SCGB2A1O75556 95 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 HMGN2P05204 90 aaKnown RBP5.57□□□□□ -1.52
VPS13B-203ENST00000358544 GALTP07902 379 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 ACAA1P09110 424 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-203ENST00000358544 STAC2Q6ZMT1 411 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 PADI1Q9ULC6 663 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 KCPQ6ZWJ8 1503 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 MAST4O15021 2626 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 PLSCR1O15162 318 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 SSSCA1O60232 199 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 HRH1P35367 487 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 ABHD12BQ7Z5M8 362 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-203ENST00000358544 ABI3BPQ7Z7G0 1075 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 PRR14Q9BWN1 585 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 PRDM7Q9NQW5 492 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 SLC22A7Q9Y694 548 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 CPMP14384 443 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 DPY19L2P2Q6ZN68 376 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 Q6ZN92 141 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 PRSS35Q8N3Z0 413 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 TMEM234Q8WY98 164 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 MOKQ9UQ07 419 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 TJP1Q07157 1748 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 LNP1A1A4G5 178 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 C17orf112F2Z3M2 114 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 ABCD4O14678 606 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 SLC2A10O95528 541 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 PRF1P14222 555 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 ACKR3P25106 362 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 NRIP2Q9BQI9 281 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 P2RY12Q9H244 342 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 ZMAT3Q9HA38 289 aaKnown RBP5.57□□□□□ -1.52
VPS13B-203ENST00000358544 RNF150Q9ULK6 438 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 WSB1Q9Y6I7 421 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 MMP2P08253 660 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 DAP3P51398 398 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms