RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 P4HA3Q7Z4N8 544 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 PRSS35Q8N3Z0 413 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 SARAFQ96BY9 339 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 SLCO5A1Q9H2Y9 848 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 SPTBN4Q9H254 2564 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 SC5DO75845 299 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 CALRP27797 417 aaKnown RBP18.11■□□□□ 0.49
TRIM4-202ENST00000354241 OPRL1P41146 370 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 RPS11P62280 158 aaKnown RBP eCLIP18.11■□□□□ 0.49
TRIM4-202ENST00000354241 ODF4Q2M2E3 257 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 WDR38Q5JTN6 314 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 TSPO2Q5TGU0 170 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 ZNF676Q8N7Q3 588 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 OR10S1Q8NGN2 331 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 OR5M9Q8NGP3 310 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 CPT1CQ8TCG5 803 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 C4orf45Q96LM5 186 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 MED18Q9BUE0 208 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 COMMD4Q9H0A8 199 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 SIAEQ9HAT2 523 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 GPR35Q9HC97 309 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 PLSCR2Q9NRY7 297 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 ZNF175Q9Y473 711 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 RER1O15258 196 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 PNPP00491 289 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 KIR3DL2P43630 455 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 RORCP51449 518 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 CXADRP78310 365 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 MRPS34P82930 218 aaKnown RBP18.1■□□□□ 0.49
TRIM4-202ENST00000354241 ROR2Q01974 943 aaKnown RBP18.1■□□□□ 0.49
TRIM4-202ENST00000354241 MFGE8Q08431 387 aaPredicted RBP18.1■□□□□ 0.49
TRIM4-202ENST00000354241 ENDOGQ14249 297 aaKnown RBP18.1■□□□□ 0.49
TRIM4-202ENST00000354241 CEACAM16Q2WEN9 425 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 RIPPLY2Q5TAB7 128 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 RPUSD3Q6P087 351 aaKnown RBP18.1■□□□□ 0.49
TRIM4-202ENST00000354241 DEGS2Q6QHC5 323 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 ZFAND2BQ8WV99 257 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 OR14A2Q96R54 314 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 C6orf62Q9GZU0 229 aaPredicted RBP18.1■□□□□ 0.49
TRIM4-202ENST00000354241 PPIL3Q9H2H8 161 aaKnown RBP18.1■□□□□ 0.49
TRIM4-202ENST00000354241 SHISA3A0PJX4 238 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 OR4C45A6NMZ5 311 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 FCGR2AP12318 317 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 HNRNPA0Q13151 305 aaKnown RBP18.1■□□□□ 0.49
TRIM4-202ENST00000354241 YIF1BQ5BJH7 314 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 ZMAT1Q5H9K5 638 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 ZNF544Q6NX49 715 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 FDX2Q6P4F2 183 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 RGP1Q92546 391 aaPredicted RBP18.1■□□□□ 0.49
TRIM4-202ENST00000354241 SLC25A46Q96AG3 418 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 TRIB1Q96RU8 372 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 BARHL1Q9BZE3 327 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 EMC9Q9Y3B6 208 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 R4GMQ9 66 aa18.1■□□□□ 0.49
TRIM4-202ENST00000354241 CEP295Q9C0D2 2601 aa18.09■□□□□ 0.49
TRIM4-202ENST00000354241 A0A1W2PPK0 400 aa18.09■□□□□ 0.49
TRIM4-202ENST00000354241 TMEM212A6NML5 194 aa18.09■□□□□ 0.49
TRIM4-202ENST00000354241 ZNF878C9JN71 531 aa18.09■□□□□ 0.49
TRIM4-202ENST00000354241 NPR2P20594 1047 aa18.09■□□□□ 0.49
TRIM4-202ENST00000354241 TAF13Q15543 124 aa18.09■□□□□ 0.49
TRIM4-202ENST00000354241 INAQ16352 499 aa18.09■□□□□ 0.49
TRIM4-202ENST00000354241 KLHL24Q6TFL4 600 aa18.09■□□□□ 0.49
TRIM4-202ENST00000354241 PAMR1Q6UXH9 720 aa18.09■□□□□ 0.49
TRIM4-202ENST00000354241 NUFIP2Q7Z417 695 aaKnown RBP18.09■□□□□ 0.49
TRIM4-202ENST00000354241 APH1AQ96BI3 265 aa18.09■□□□□ 0.49
TRIM4-202ENST00000354241 DACH2Q96NX9 599 aa18.09■□□□□ 0.49
TRIM4-202ENST00000354241 KCNS3Q9BQ31 491 aa18.09■□□□□ 0.49
TRIM4-202ENST00000354241 LINC00470Q9BZP3 86 aa18.09■□□□□ 0.49
TRIM4-202ENST00000354241 MMP27Q9H306 513 aa18.09■□□□□ 0.49
TRIM4-202ENST00000354241 SLC7A10Q9NS82 523 aa18.09■□□□□ 0.49
TRIM4-202ENST00000354241 TMEM38BQ9NVV0 291 aa18.09■□□□□ 0.49
TRIM4-202ENST00000354241 SLC22A13Q9Y226 551 aa18.09■□□□□ 0.49
TRIM4-202ENST00000354241 NCOA6Q14686 2063 aaPredicted RBP18.09■□□□□ 0.49
TRIM4-202ENST00000354241 LAMA5O15230 3695 aa18.08■□□□□ 0.49
TRIM4-202ENST00000354241 LOC110117498-PIK3R3F6TDL0 507 aa18.08■□□□□ 0.49
TRIM4-202ENST00000354241 CRYABP02511 175 aaKnown RBP18.08■□□□□ 0.49
TRIM4-202ENST00000354241 MYL9P24844 172 aa18.08■□□□□ 0.49
TRIM4-202ENST00000354241 CATSPERDQ86XM0 798 aa18.08■□□□□ 0.49
TRIM4-202ENST00000354241 PPP1R14AQ96A00 147 aa18.08■□□□□ 0.49
TRIM4-202ENST00000354241 FOXB1Q99853 325 aa18.08■□□□□ 0.49
TRIM4-202ENST00000354241 NXF2Q9GZY0 626 aaKnown RBP18.08■□□□□ 0.49
TRIM4-202ENST00000354241 ZNF71Q9NQZ8 489 aaPredicted RBP18.08■□□□□ 0.49
TRIM4-202ENST00000354241 H3BSH0 61 aa18.08■□□□□ 0.48
TRIM4-202ENST00000354241 SRSF10O75494 262 aaKnown RBP18.08■□□□□ 0.48
TRIM4-202ENST00000354241 GATBO75879 557 aaKnown RBP18.08■□□□□ 0.48
TRIM4-202ENST00000354241 B4GALT1P15291 398 aa18.08■□□□□ 0.48
TRIM4-202ENST00000354241 HSD11B1P28845 292 aa18.08■□□□□ 0.48
TRIM4-202ENST00000354241 MTNR1BP49286 362 aa18.08■□□□□ 0.48
TRIM4-202ENST00000354241 CCR9P51686 369 aa18.08■□□□□ 0.48
TRIM4-202ENST00000354241 CAV3P56539 151 aa18.08■□□□□ 0.48
TRIM4-202ENST00000354241 MOGQ16653 247 aa18.08■□□□□ 0.48
TRIM4-202ENST00000354241 FAM27BQ5VT28 67 aa18.08■□□□□ 0.48
TRIM4-202ENST00000354241 ZNF100Q8IYN0 542 aa18.08■□□□□ 0.48
TRIM4-202ENST00000354241 RDH10Q8IZV5 341 aa18.08■□□□□ 0.48
TRIM4-202ENST00000354241 OR6Q1Q8NGQ2 317 aa18.08■□□□□ 0.48
TRIM4-202ENST00000354241 SH3GL3Q99963 347 aa18.08■□□□□ 0.48
TRIM4-202ENST00000354241 CLCF1Q9UBD9 225 aa18.08■□□□□ 0.48
TRIM4-202ENST00000354241 ARHGAP21Q5T5U3 1957 aa18.07■□□□□ 0.48
TRIM4-202ENST00000354241 TMEM269A0A1B0GVZ9 245 aa18.07■□□□□ 0.48
TRIM4-202ENST00000354241 OR6C65A6NJZ3 312 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms