RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ZNF782Q6ZMW2 699 aaPredicted RBP5.39□□□□□ -1.55
CLCN3-201ENST00000347613 DCXRQ7Z4W1 244 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF679Q8IYX0 411 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 METTL21AQ8WXB1 218 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 FAM46BQ96A09 425 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 ADAT3Q96EY9 351 aaPredicted RBP5.39□□□□□ -1.55
CLCN3-201ENST00000347613 RBM14Q96PK6 669 aaKnown RBP5.39□□□□□ -1.55
CLCN3-201ENST00000347613 OR2A7Q96R45 310 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 UTP23Q9BRU9 249 aaKnown RBP5.39□□□□□ -1.55
CLCN3-201ENST00000347613 RANBP3Q9H6Z4 567 aaPredicted RBP5.39□□□□□ -1.55
CLCN3-201ENST00000347613 PRR13Q9NZ81 148 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 GLTPQ9NZD2 209 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 VSX1Q9NZR4 365 aaPredicted RBP5.39□□□□□ -1.55
CLCN3-201ENST00000347613 SCP2D1Q9UJQ7 156 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 KCNMB2Q9Y691 235 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 LOC100509620A0A075B734 347 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 A0A0A6YYD4 124 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 A0A1B0GUH1 482 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 TMEM235A6NFC5 223 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 LDLRAD4O15165 306 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 ZNHIT1O43257 154 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 ITGA10O75578 1167 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 CRYZL1O95825 349 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 CSN2P05814 226 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 IL12BP29460 328 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 GALNSP34059 522 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 BLKP51451 505 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 MECP2P51608 486 aaKnown RBP5.39□□□□□ -1.55
CLCN3-201ENST00000347613 PSMD4P55036 377 aaKnown RBP5.39□□□□□ -1.55
CLCN3-201ENST00000347613 PRSS12P56730 875 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 HSF2Q03933 536 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 EGR3Q06889 387 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 SERTAD2Q14140 314 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 SGCBQ16585 318 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 AANATQ16613 207 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 ELFN2Q5R3F8 820 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 SIGIRRQ6IA17 410 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 LIN54Q6MZP7 749 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 LRFN4Q6PJG9 635 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 CFAP77Q6ZQR2 320 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF767PQ75MW2 155 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 D2HGDHQ8N465 521 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 ESX1Q8N693 406 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 BHLHE23Q8NDY6 225 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 OR52N4Q8NGI2 321 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 OR13C8Q8NGS7 320 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 GPR148Q8TDV2 347 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 TSEN15Q8WW01 171 aaKnown RBP5.39□□□□□ -1.55
CLCN3-201ENST00000347613 ELMOD3Q96FG2 381 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 LINC00052Q96N35 136 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 DPYSL5Q9BPU6 564 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 GINS4Q9BRT9 223 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 NICN1Q9BSH3 213 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 TXNIPQ9H3M7 391 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 FGF21Q9NSA1 209 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 B3GNT2Q9NY97 397 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 EPHA6Q9UF33 1036 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 FBXL2Q9UKC9 423 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 ARID1AO14497 2285 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 TEX51A0A1B0GUA7 166 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 A0A1W2PNR3 127 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 A0A1W2PQM1 296 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 RHPN2P1A8MT19 583 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 CCSO14618 274 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 LPLP06858 475 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 DCNP07585 359 aaKnown RBP5.38□□□□□ -1.55
CLCN3-201ENST00000347613 P2RY4P51582 365 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 RAG2P55895 527 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 FOXF1Q12946 379 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 SMAD4Q13485 552 aaKnown RBP5.38□□□□□ -1.55
CLCN3-201ENST00000347613 OPCMLQ14982 345 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 RAB30Q15771 203 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 FGD2Q7Z6J4 655 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 GKN2Q86XP6 184 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 SLC43A2Q8N370 569 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 ACBD4Q8NC06 268 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 STT3BQ8TCJ2 826 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF578Q96N58 590 aaPredicted RBP5.38□□□□□ -1.55
CLCN3-201ENST00000347613 SLC6A7Q99884 636 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 TBL1XR1Q9BZK7 514 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 ATG5Q9H1Y0 275 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 CNTD2Q9H8S5 307 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF581Q9P0T4 197 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 OPN4Q9UHM6 478 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 GOSR2O14653 212 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 TO15178 435 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 ARPC5O15511 151 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 PSMA6P60900 246 aaKnown RBP5.38□□□□□ -1.55
CLCN3-201ENST00000347613 ROM1Q03395 351 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 HLXQ14774 488 aaPredicted RBP5.38□□□□□ -1.55
CLCN3-201ENST00000347613 MFSD13AQ14CX5 517 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 FAM69AQ5T7M9 428 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 HACD4Q5VWC8 232 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 TMPPEQ6ZT21 453 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 COMMD7Q86VX2 200 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 TDHQ8IZJ6 230 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.38□□□□□ -1.55
CLCN3-201ENST00000347613 RELL2Q8NC24 303 aaPredicted RBP5.38□□□□□ -1.55
CLCN3-201ENST00000347613 GPX8Q8TED1 209 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 ASB10Q8WXI3 467 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms