RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 EMC4Q5J8M3 183 aa15.96■□□□□ 0.14
SPAST-202ENST00000345662 ELFN2Q5R3F8 820 aa15.96■□□□□ 0.14
SPAST-202ENST00000345662 DBX2Q6ZNG2 339 aa15.96■□□□□ 0.14
SPAST-202ENST00000345662 MARCH1Q8TCQ1 289 aa15.96■□□□□ 0.14
SPAST-202ENST00000345662 WFDC5Q8TCV5 224 aa15.96■□□□□ 0.14
SPAST-202ENST00000345662 NUDCD2Q8WVJ2 157 aa15.96■□□□□ 0.14
SPAST-202ENST00000345662 RGPD5Q99666 1765 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 ZNF727A8MUV8 499 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 APOA2P02652 100 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 HRH1P35367 487 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 ZNF75AQ96N20 296 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 CCNL2Q96S94 520 aaPredicted RBP15.95■□□□□ 0.14
SPAST-202ENST00000345662 PRAMEF26H0Y7S4 382 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 ZNF250P15622 560 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 SNCAP37840 140 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 SHISA6Q6ZSJ9 500 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 TMEM123Q8N131 208 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 OR14A16Q8NHC5 309 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 PIGTQ969N2 578 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 GAS2L1Q99501 681 aaPredicted RBP15.95■□□□□ 0.14
SPAST-202ENST00000345662 MMP26Q9NRE1 261 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 MAN2B1O00754 1011 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 ATF1P18846 271 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 TMEM229BQ8NBD8 167 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 AKR7LQ8NHP1 331 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 ZNF2Q9BSG1 426 aaPredicted RBP15.95■□□□□ 0.14
SPAST-202ENST00000345662 DOT1LQ8TEK3 1739 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 LINC00862A6NCI5 91 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 CBX7O95931 251 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 MGST1P10620 155 aaKnown RBP15.95■□□□□ 0.14
SPAST-202ENST00000345662 SLC6A1P30531 599 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 PCBP4P57723 403 aaKnown RBP15.95■□□□□ 0.14
SPAST-202ENST00000345662 ORAI1Q96D31 301 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 PLEKHB1Q9UF11 243 aaPredicted RBP15.95■□□□□ 0.14
SPAST-202ENST00000345662 V9GYH0 126 aa15.95■□□□□ 0.14
SPAST-202ENST00000345662 TRBV5-4A0A0C4DH59 114 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 CEBPBP17676 345 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 ACKR3P25106 362 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 ZNF485Q8NCK3 441 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 LHFPL5Q8TAF8 219 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 MED9Q9NWA0 146 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 CHRNA9Q9UGM1 479 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 SRPK3Q9UPE1 567 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 MAST2Q6P0Q8 1798 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 PHLPP1O60346 1717 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 UPK1AO00322 258 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 NXPH3O95157 252 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 CLDN17P56750 224 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 PJVKQ0ZLH3 352 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 CAMKMTQ7Z624 323 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 C9orf62Q8N4C0 152 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 EXD3Q8N9H8 876 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 TSLPQ969D9 159 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 SHDQ96IW2 340 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 ZDHHC5Q9C0B5 715 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 RYDENQ9NUL5 291 aaKnown RBP15.94■□□□□ 0.14
SPAST-202ENST00000345662 HAO2Q9NYQ3 351 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 TRAPPC2LQ9UL33 140 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 A4GNTQ9UNA3 340 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 CNTRLQ7Z7A1 2325 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 PHYHD1Q5SRE7 291 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 TMPRSS7Q7RTY8 843 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 TMEM30AQ9NV96 361 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 IRF2P14316 349 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 TMEM176BQ3YBM2 270 aaPredicted RBP15.94■□□□□ 0.14
SPAST-202ENST00000345662 COMMD1Q8N668 190 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 GOT1L1Q8NHS2 421 aaPredicted RBP15.94■□□□□ 0.14
SPAST-202ENST00000345662 ABHD5Q8WTS1 349 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 VPS25Q9BRG1 176 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 JAM3Q9BX67 310 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 CRLF2Q9HC73 371 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 LYRM4Q9HD34 91 aa15.94■□□□□ 0.14
SPAST-202ENST00000345662 PI3P19957 117 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 CDK5Q00535 292 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 C1orf140Q5VVS0 124 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 CORO6Q6QEF8 472 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 SLC16A14Q7RTX9 510 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.93■□□□□ 0.14
SPAST-202ENST00000345662 ZFP62Q8NB50 900 aaPredicted RBP15.93■□□□□ 0.14
SPAST-202ENST00000345662 EDAQ92838 391 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 ENKD1Q9H0I2 346 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 F11P03951 625 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 BSGP35613 385 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 ELLP55199 621 aaPredicted RBP15.93■□□□□ 0.14
SPAST-202ENST00000345662 FABP9Q0Z7S8 132 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 HCSTQ9UBK5 93 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 FLVCR1Q9Y5Y0 555 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 A0A087WV62 115 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 HMSDA8MTL9 139 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 PGFP49763 221 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 GRB2P62993 217 aaKnown RBP15.93■□□□□ 0.14
SPAST-202ENST00000345662 DOK3Q7L591 496 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 DND1Q8IYX4 353 aaKnown RBP15.93■□□□□ 0.14
SPAST-202ENST00000345662 KIRREL1Q96J84 757 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 MICAL3Q7RTP6 2002 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 DDX60Q8IY21 1712 aaKnown RBP15.93■□□□□ 0.14
SPAST-202ENST00000345662 LIMS3P0CW19 117 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 LIMS4P0CW20 117 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 BMPR1AP36894 532 aa15.93■□□□□ 0.14
SPAST-202ENST00000345662 TLE1Q04724 770 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms