RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 SLC9A3R2Q15599 337 aa13.67□□□□□ -0.22
PCDHB13-201ENST00000341948 SLC22A25Q6T423 547 aa13.67□□□□□ -0.22
PCDHB13-201ENST00000341948 C16orf47Q6ZP98 133 aaPredicted RBP13.67□□□□□ -0.22
PCDHB13-201ENST00000341948 GPR119Q8TDV5 335 aa13.67□□□□□ -0.22
PCDHB13-201ENST00000341948 SLC25A46Q96AG3 418 aa13.67□□□□□ -0.22
PCDHB13-201ENST00000341948 DCLRE1CQ96SD1 692 aaKnown RBP13.67□□□□□ -0.22
PCDHB13-201ENST00000341948 SLCO5A1Q9H2Y9 848 aa13.67□□□□□ -0.22
PCDHB13-201ENST00000341948 OR5AS1Q8N127 324 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 B3GAT1Q9P2W7 334 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 GNG12Q9UBI6 72 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 TP53TG5Q9Y2B4 290 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 CROCCQ5TZA2 2017 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 SVILO95425 2214 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 GUSBP08236 651 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 TPT1P13693 172 aaKnown RBP13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 NAGAP17050 411 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 OR2Y1Q8NGV0 311 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 C11orf54Q9H0W9 315 aaPredicted RBP13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 PTTG3PQ9NZH4 202 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 RAB22AQ9UL26 194 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 PIGLQ9Y2B2 252 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 TET1Q8NFU7 2136 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 CCDC163A0A0D9SF12 145 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 LRRC30A6NM36 301 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 UBBP0CG47 229 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 S100PP25815 95 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 RAB31Q13636 194 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 SIAH3Q8IW03 269 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 D2HGDHQ8N465 521 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 MAFIPQ8WZ33 124 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 NDUFB11Q9NX14 153 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 SHISA8B8ZZ34 492 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 STPG1Q5TH74 334 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 STEAP1BQ6NZ63 245 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 STK35Q8TDR2 534 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 TSSK2Q96PF2 358 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 TXNIPQ9H3M7 391 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 METTL17Q9H7H0 456 aaPredicted RBP13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 PCOLCE2Q9UKZ9 415 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 TCFL5Q9UL49 500 aa13.66□□□□□ -0.22
PCDHB13-201ENST00000341948 CACNA1EQ15878 2313 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 SULT1B1O43704 296 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 GREM1O60565 184 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 TBX19O60806 448 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 CASP3P42574 277 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 RPL23AP62750 156 aaKnown RBP13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 RANGRFQ9HD47 186 aaPredicted RBP13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 IGHV5-10-1A0A0J9YXX1 117 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 BET1O15155 118 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 CPEP16870 476 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 ZNF628Q5EBL2 1059 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 RNF170Q96K19 258 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 ZNF254O75437 659 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 GPX5O75715 221 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 TCRBP04435 133 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 EPHA2P29317 976 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 TRILQ7L0X0 811 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 ZNF546Q86UE3 836 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 LYSMD2Q8IV50 215 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 SYS1Q8N2H4 156 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 C22orf15Q8WYQ4 148 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 H1FXQ92522 213 aaKnown RBP13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 INTS12Q96CB8 462 aaKnown RBP13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 SLAMF6Q96DU3 332 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 RAF1P04049 648 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 LAP3P28838 519 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 MEOX1P50221 254 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 UBE2IP63279 158 aaKnown RBP13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 AGERQ15109 404 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 CLPPQ16740 277 aaPredicted RBP13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 PRICKLE4Q2TBC4 344 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 SOWAHCQ53LP3 525 aaPredicted RBP13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 ZNF679Q8IYX0 411 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 CPNE4Q96A23 557 aaPredicted RBP13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 GPR87Q9BY21 358 aa13.65□□□□□ -0.22
PCDHB13-201ENST00000341948 NUP214P35658 2090 aaPredicted RBP13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 ARR3P36575 388 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 WNT3P56703 355 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 EDDM3BP56851 147 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 SFTPA2Q8IWL1 248 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 SEMA6DQ8NFY4 1073 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 RNF167Q9H6Y7 350 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 NTN4Q9HB63 628 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 ISYNA1Q9NPH2 558 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 GLTPQ9NZD2 209 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 RIF1Q5UIP0 2472 aaKnown RBP13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 TRIM64CA6NLI5 447 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 GPR137BO60478 399 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 PTBP1P26599 531 aaKnown RBP eCLIP13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 CHRNB4P30926 498 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 HCCSP53701 268 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 GLIPR1L1Q6UWM5 242 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 MRPL41Q8IXM3 137 aaKnown RBP13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 PLEKHA3Q9HB20 300 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 ZFP64Q9NPA5 681 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 LOC107986453A0A1B0GWG9 222 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 SLC22A23A1A5C7 686 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 PRSS37A4D1T9 235 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 TRABD2BA6NFA1 517 aa13.64□□□□□ -0.23
PCDHB13-201ENST00000341948 LINC01387J3KSC0 135 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms