RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 DCXRQ7Z4W1 244 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 APCDD1LQ8NCL9 501 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 OR8S1Q8NH09 359 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 NPAS1Q99742 590 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 NUDT22Q9BRQ3 303 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 FOXQ1Q9C009 403 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 G6PC2Q9NQR9 355 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 OR52A1Q9UKL2 312 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 MUC6Q6W4X9 2439 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 L7N2F9 121 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 BCAT2O15382 392 aaPredicted RBP13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 AQP8O94778 261 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 ISG15P05161 165 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 CXCL2P19875 107 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 ACHEP22303 614 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 ARRB1P49407 418 aaPredicted RBP13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 SUMO3P55854 103 aaPredicted RBP13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 PCK2Q16822 640 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 NHLRC1Q6VVB1 395 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 ZNF627Q7L945 461 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 ST7LQ8TDW4 575 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 THAP3Q8WTV1 239 aaPredicted RBP13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 KCNK17Q96T54 332 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 LRFN3Q9BTN0 628 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 GSX2Q9BZM3 304 aa13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 CGGBP1Q9UFW8 167 aaPredicted RBP13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 MRPS18BQ9Y676 258 aaKnown RBP13.49□□□□□ -0.25
TNFSF13-201ENST00000338784 TMEM269A0A1B0GVZ9 245 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 LOC107986453A0A1B0GWG9 222 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 DCDC2BA2VCK2 349 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 NPIPB13A6NJU9 1138 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 NPIPB4C9JG80 1138 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 ZNF354AO60765 605 aaPredicted RBP13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 FCER2P06734 321 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 LPLP06858 475 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 HEXBP07686 556 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 GABRA1P14867 456 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 TAS2R19P59542 299 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 POU3F1Q03052 451 aaPredicted RBP13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 TLE3Q04726 772 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 DEGS2Q6QHC5 323 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 ZNF704Q6ZNC4 412 aaPredicted RBP13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 ANKRD37Q7Z713 158 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 ADGRE4PQ86SQ3 457 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 LINC00346Q8IVM7 164 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 GABRG1Q8N1C3 465 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 OR51A2Q8NGJ7 313 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 DVL3Q92997 716 aaPredicted RBP13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 PNPLA2Q96AD5 504 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 DDIT4LQ96D03 193 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 SEH1LQ96EE3 360 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 APMAPQ9HDC9 416 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 MED11Q9P086 117 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 VDAC3Q9Y277 283 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 ALPK2Q86TB3 2170 aa13.48□□□□□ -0.25
TNFSF13-201ENST00000338784 MCRIP1C9JLW8 97 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 SHOXO15266 292 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 ZNF208O43345 1280 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 PDGFAP04085 211 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 GIMD1P0DJR0 217 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 BCKDHBP21953 392 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 HSF1Q00613 529 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 SPOCK1Q08629 439 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 TMEM244Q5VVB8 128 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 ARSKQ6UWY0 536 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 RABEPKQ7Z6M1 372 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 COMMD7Q86VX2 200 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 MUC20Q8N307 709 aaPredicted RBP13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 JAGN1Q8N5M9 183 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 NFAM1Q8NET5 270 aaPredicted RBP13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 OR2AK2Q8NG84 335 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 OR5M1Q8NGP8 315 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 NUBPLQ8TB37 319 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 PCNPQ8WW12 178 aaKnown RBP13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 DNASE2BQ8WZ79 361 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 PMEPA1Q969W9 287 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 WDR89Q96FK6 387 aaPredicted RBP13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 SFXN2Q96NB2 322 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 EXO5Q9H790 373 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 SCPEP1Q9HB40 452 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 CHST11Q9NPF2 352 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 OPN4Q9UHM6 478 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 TP53BP1Q12888 1972 aaPredicted RBP13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 SEC16AO15027 2179 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 IGLV3-12A0A075B6K2 115 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 MEN1O00255 615 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 DOK2O60496 412 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 H2BFSP57053 126 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 ARPC4P59998 168 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 TMEM229BQ8NBD8 167 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 TNFAIP8L1Q8WVP5 186 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 C5orf34Q96MH7 638 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 CMKLR1Q99788 373 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 MESP1Q9BRJ9 268 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 POTEKPQ9BYX7 375 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 MED29Q9NX70 200 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 UPB1Q9UBR1 384 aa13.47□□□□□ -0.25
TNFSF13-201ENST00000338784 A0A0A6YYH2 397 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms