RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 BTLAQ7Z6A9 289 aa3.65□□□□□ -1.82
MCF2-201ENST00000338585 SIAH3Q8IW03 269 aa3.65□□□□□ -1.82
MCF2-201ENST00000338585 LRRC18Q8N456 261 aa3.65□□□□□ -1.82
MCF2-201ENST00000338585 ZNF454Q8N9F8 522 aa3.65□□□□□ -1.82
MCF2-201ENST00000338585 OR51A4Q8NGJ6 313 aa3.65□□□□□ -1.82
MCF2-201ENST00000338585 ASB17Q8WXJ9 295 aa3.65□□□□□ -1.82
MCF2-201ENST00000338585 NABP1Q96AH0 204 aa3.65□□□□□ -1.82
MCF2-201ENST00000338585 SLAMF6Q96DU3 332 aa3.65□□□□□ -1.82
MCF2-201ENST00000338585 ABHD17AQ96GS6 310 aa3.65□□□□□ -1.82
MCF2-201ENST00000338585 C4orf45Q96LM5 186 aa3.65□□□□□ -1.82
MCF2-201ENST00000338585 MROQ9BYG7 248 aa3.65□□□□□ -1.82
MCF2-201ENST00000338585 PRRG4Q9BZD6 226 aa3.65□□□□□ -1.82
MCF2-201ENST00000338585 C6orf62Q9GZU0 229 aaPredicted RBP3.65□□□□□ -1.82
MCF2-201ENST00000338585 BRD7Q9NPI1 651 aa3.65□□□□□ -1.82
MCF2-201ENST00000338585 CCDC59Q9P031 241 aaKnown RBP3.65□□□□□ -1.82
MCF2-201ENST00000338585 GDF2Q9UK05 429 aaPredicted RBP3.65□□□□□ -1.82
MCF2-201ENST00000338585 MCTS1Q9ULC4 181 aaKnown RBP3.65□□□□□ -1.82
MCF2-201ENST00000338585 RCE1Q9Y256 329 aa3.65□□□□□ -1.82
MCF2-201ENST00000338585 TP53TG5Q9Y2B4 290 aa3.65□□□□□ -1.82
MCF2-201ENST00000338585 NOSIPQ9Y314 301 aaKnown RBP3.65□□□□□ -1.82
MCF2-201ENST00000338585 PCDHGA9Q9Y5G4 932 aaKnown RBP3.65□□□□□ -1.82
MCF2-201ENST00000338585 BOD1L1Q8NFC6 3051 aa3.65□□□□□ -1.82
MCF2-201ENST00000338585 NCOR2Q9Y618 2525 aa3.65□□□□□ -1.82
MCF2-201ENST00000338585 ANKRD61A6NGH8 418 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 MKRN2OSH3BPM6 223 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 K7ENP7 123 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 CTDSP2O14595 271 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 CASKO14936 926 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 PIN1P1O15428 100 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 SRSF10O75494 262 aaKnown RBP3.65□□□□□ -1.83
MCF2-201ENST00000338585 IL1AP01583 271 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 BMP4P12644 408 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 CPN1P15169 458 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 B4GALT1P15291 398 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 CD53P19397 219 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 MSR1P21757 451 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 CAPZA2P47755 286 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 SOX2P48431 317 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 OR10A3P58181 314 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 KCNMB1Q16558 191 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 TBR1Q16650 682 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 CEACAM16Q2WEN9 425 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 ZMAT1Q5H9K5 638 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 C9orf135Q5VTT2 229 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 KCTD18Q6PI47 426 aaPredicted RBP3.65□□□□□ -1.83
MCF2-201ENST00000338585 INO80CQ6PI98 192 aaPredicted RBP3.65□□□□□ -1.83
MCF2-201ENST00000338585 FOXL2NBQ6ZUU3 175 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 CHMP1BQ7LBR1 199 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 NUFIP2Q7Z417 695 aaKnown RBP3.65□□□□□ -1.83
MCF2-201ENST00000338585 GPR137CQ8N3F9 429 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 IL17RDQ8NFM7 739 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 OR5M9Q8NGP3 310 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 OR6Q1Q8NGQ2 317 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 OR5AK2Q8NH90 309 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 FNDC8Q8TC99 324 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 RNF133Q8WVZ7 376 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 PNPLA2Q96AD5 504 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 SLC25A46Q96AG3 418 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 DACH2Q96NX9 599 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 SH3GL3Q99963 347 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 C1orf198Q9H425 327 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 PNRC2Q9NPJ4 139 aaKnown RBP3.65□□□□□ -1.83
MCF2-201ENST00000338585 SLC7A10Q9NS82 523 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 PLEKHB1Q9UF11 243 aaPredicted RBP3.65□□□□□ -1.83
MCF2-201ENST00000338585 GSTK1Q9Y2Q3 226 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 ZNF281Q9Y2X9 895 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 EMC9Q9Y3B6 208 aa3.65□□□□□ -1.83
MCF2-201ENST00000338585 C5orf63A6NC05 138 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 SLC22A20A6NK97 555 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 GPR171O14626 319 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 MRPL33O75394 65 aaKnown RBP3.64□□□□□ -1.83
MCF2-201ENST00000338585 H2BFMP0C1H6 154 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 PATE4P0C8F1 98 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 SLC2A1P11166 492 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 NR2C1P13056 603 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 GALP22466 123 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 RORCP51449 518 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 PRKXP51817 358 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 RIDAP52758 137 aaKnown RBP3.64□□□□□ -1.83
MCF2-201ENST00000338585 TAGLNQ01995 201 aaKnown RBP3.64□□□□□ -1.83
MCF2-201ENST00000338585 MOGQ16653 247 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 FGD2Q7Z6J4 655 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 CATSPERDQ86XM0 798 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 GCNT2Q8N0V5 402 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 MFSD4AQ8N468 514 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 MS4A15Q8N5U1 240 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 ZNF676Q8N7Q3 588 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 OR2AJ1Q8NGZ0 328 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 FGFBP3Q8TAT2 258 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 ZFAND2BQ8WV99 257 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 SLC7A6Q92536 515 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 TMEM45BQ96B21 275 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 INTS12Q96CB8 462 aaKnown RBP3.64□□□□□ -1.83
MCF2-201ENST00000338585 FBXO17Q96EF6 278 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 COQ7Q99807 217 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 MED18Q9BUE0 208 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 PRDM14Q9GZV8 571 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 NXF2Q9GZY0 626 aaKnown RBP3.64□□□□□ -1.83
MCF2-201ENST00000338585 SLC25A18Q9H1K4 315 aa3.64□□□□□ -1.83
MCF2-201ENST00000338585 NELFAQ9H3P2 528 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms