RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CENPMQ9NSP4 180 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 CGGBP1Q9UFW8 167 aaPredicted RBP14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 RTTNQ86VV8 2226 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 UNC13CQ8NB66 2214 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 TMEM212A6NML5 194 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 OR4C45A6NMZ5 311 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 EIF1AYO14602 144 aaKnown RBP14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 XRCC3O43542 346 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 SUSD5O60279 629 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 AKAIN1P0CW23 69 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 VSIG10L2P0DP72 767 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 TSC22D1Q15714 1073 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 NKPD1Q17RQ9 610 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 HSD17B13Q7Z5P4 300 aaPredicted RBP14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 SPAG16Q8N0X2 631 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 MUC20Q8N307 709 aaPredicted RBP14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 CHST4Q8NCG5 386 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 ZC3H10Q96K80 434 aaKnown RBP14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 VRK1Q99986 396 aaPredicted RBP14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 CHST6Q9GZX3 395 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 MFFQ9GZY8 342 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 CHRDQ9H2X0 955 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 PLEKHA1Q9HB21 404 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 PIPOXQ9P0Z9 390 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 FANCMQ8IYD8 2048 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 MPTX1A8MV57 137 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 PRAMEF26H0Y7S4 382 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 SOX1O00570 391 aaPredicted RBP14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 AMY2AP04746 511 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 CSF1P09603 554 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 DNASE1L1P49184 302 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 BLOC1S1P78537 153 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 TOMM34Q15785 309 aaPredicted RBP14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 WDR38Q5JTN6 314 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 NDUFAF7Q7L592 441 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 MARCH3Q86UD3 253 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 ZSCAN1Q8NBB4 408 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 GPBAR1Q8TDU6 330 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 TAS2R8Q9NYW2 309 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 TRANK1O15050 2925 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 SPTBN5Q9NRC6 3674 aaKnown RBP14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 ASXL3Q9C0F0 2248 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 ZNF749O43361 778 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 IFNA4P05014 189 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 SMIM6P0DI80 62 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 ALOX5APP20292 161 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 RIDAP52758 137 aaKnown RBP14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 ZP2Q05996 745 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 SPOCK1Q08629 439 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 RASGEF1BQ0VAM2 473 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 TGIF1Q15583 401 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 C2orf68Q2NKX9 166 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 ATG4DQ86TL0 474 aaPredicted RBP14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 KLHDC7BQ96G42 594 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 ZDHHC12Q96GR4 267 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 SPOCK3Q9BQ16 436 aa14.91□□□□□ -0.02
CDC42EP4-201ENST00000335793 TRIOO75962 3097 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 NPIPB9F8W1W9 429 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 H7C417 338 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 SRPX2O60687 465 aaPredicted RBP14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 RAB3DO95716 219 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 EIF1AXP47813 144 aaKnown RBP14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 IKZF1Q13422 519 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 PRAMEF17Q5VTA0 474 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 STEAP1BQ6NZ63 245 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 TSSK4Q6SA08 328 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 OR2AK2Q8NG84 335 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 TSLPQ969D9 159 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 DCBLD2Q96PD2 775 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 SSX3Q99909 188 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 NKX2-4Q9H2Z4 354 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 MTFP1Q9UDX5 166 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 PLSCR5A0PG75 271 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 ZNF705EA8MWA4 302 aaPredicted RBP14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 FARS2O95363 451 aaKnown RBP14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 ITGA5P08648 1049 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 NQO2P16083 231 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 GLYATL3Q5SZD4 288 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 MDGA2Q7Z553 956 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 SPICQ8N5J4 248 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 FAM174AQ8TBP5 190 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 LMX1AQ8TE12 382 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 FAM221BA6H8Z2 402 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 CTAG2O75638 210 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 ZNF432O94892 652 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 GABRG2P18507 467 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 MST1P26927 711 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 CD1CP29017 333 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 CSF2RBP32927 897 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 GFERP55789 205 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 H2BFSP57053 126 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 EGR4Q05215 589 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 EIF2S3LQ2VIR3 472 aaKnown RBP14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 CHRDL2Q6WN34 429 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 FAM160A2Q8N612 972 aaPredicted RBP14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 MFRPQ9BY79 579 aa14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 NOP16Q9Y3C1 178 aaKnown RBP14.9□□□□□ -0.02
CDC42EP4-201ENST00000335793 C2orf16Q68DN1 1984 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 A0A1W2PPE3 182 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 SNRPGP15A8MWD9 76 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms