RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 CMTM1Q8IZ96 169 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 D2HGDHQ8N465 521 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 PIGTQ969N2 578 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 TM4SF19Q96DZ7 209 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 PCDHGA1Q9Y5H4 931 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 TRAV1-2A0A0B4J238 106 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 SPDEFO95238 335 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 SSTR2P30874 369 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 AKR1C2P52895 323 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 ACTBL2Q562R1 376 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 CCDC71Q8IV32 467 aaPredicted RBP10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 STOML3Q8TAV4 291 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 DCUN1D4Q92564 292 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 PPA2Q9H2U2 334 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 MOB1AQ9H8S9 216 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZFP57Q9NU63 452 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 SLC5A6Q9Y289 635 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 R4GMQ9 66 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 FITM1A5D6W6 292 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 CHRM2P08172 466 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 CASP6P55212 293 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 TAS2R20P59543 309 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 SLC25A35Q3KQZ1 300 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 CMTM4Q8IZR5 234 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 SLC7A5P1Q8MH63 180 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 OR10G3Q8NGC4 313 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 OTOSQ8NHW6 89 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 RRNAD1Q96FB5 475 aaKnown RBP10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 C10orf90Q96M02 699 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 IP6K3Q96PC2 410 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 JAM3Q9BX67 310 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 C20orf85Q9H1P6 137 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 ADGRL4Q9HBW9 690 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 EXOSC3Q9NQT5 275 aaKnown RBP10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 SPTA1P02549 2419 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 SHISA8B8ZZ34 492 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 M0QYG6 137 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 PLPP2O43688 288 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 CXCL13O43927 109 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 CBR3O75828 277 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 TSPAN9O75954 239 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 STK17BO94768 372 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 UBBP0CG47 229 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 ABOP16442 354 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 CCL11P51671 97 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 ECH1Q13011 328 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 CD226Q15762 336 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 LSMEM1Q8N8F7 131 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 DERL3Q96Q80 235 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 GDF15Q99988 308 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZPBPQ9BS86 351 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 NICN1Q9BSH3 213 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 MYOTQ9UBF9 498 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 PIGLQ9Y2B2 252 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 TRAPPC2P0DI81 140 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 TRAPPC2BP0DI82 140 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 EMP3P54852 163 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 CLDN6P56747 220 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 WDR74Q6RFH5 385 aaPredicted RBP10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 OR1M1Q8NGA1 313 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 FNDC9Q8TBE3 224 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 OIT3Q8WWZ8 545 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 MOGAT1Q96PD6 335 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 ACKR4Q9NPB9 350 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 PILRAQ9UKJ1 303 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 ATF4P18848 351 aaPredicted RBP10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 MPLP40238 635 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 GAB4Q2WGN9 574 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 C1orf210Q8IVY1 113 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 APH1AQ96BI3 265 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 OR8B4Q96RC9 309 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 TTLL8A6PVC2 850 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 GALP22466 123 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 IL32P24001 234 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 CDKN2AP42771 156 aaKnown RBP10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 MYBPHQ13203 477 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 INSL4Q14641 139 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 ARSKQ6UWY0 536 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 PRR18Q8N4B5 295 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 FAM71CQ8NEG0 241 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 GPA33Q99795 319 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 MICU1Q9BPX6 476 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 TMEM9BQ9NQ34 198 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 BOLA1Q9Y3E2 137 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 RP1P56715 2156 aa10.32□□□□□ -0.76
PCDHGC3-201ENST00000308177 CT45A8P0DMV1 189 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 CT45A9P0DMV2 189 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 CT45A2Q5DJT8 189 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 SLC25A21Q9BQT8 299 aaPredicted RBP10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 DUSP15Q9H1R2 295 aaPredicted RBP10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 GPR84Q9NQS5 396 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 FSCN3Q9NQT6 498 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 LSM5Q9Y4Y9 91 aaKnown RBP10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 A0A0A6YYH2 397 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 A6NJ64 397 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 CNOT4O95628 575 aaKnown RBP10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 GALNSP34059 522 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 DDOSTP39656 456 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 SLC37A1P57057 533 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 LCN10Q6JVE6 187 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms