RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 POLE4Q9NR33 117 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 TXNL4BQ9NX01 149 aaKnown RBP6.14□□□□□ -1.43
PTCD2-201ENST00000308077 CYB5R1Q9UHQ9 305 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 IKZF2Q9UKS7 526 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 LHFPL6Q9Y693 200 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 MGAQ8IWI9 3026 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 ARHGAP21Q5T5U3 1957 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 TRDV1A0A1B0GX56 115 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 CD8B2A6NJW9 211 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 ERVH48-1M5A8F1 160 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 GABRPO00591 440 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 SULT1C4O75897 302 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 RPP14O95059 124 aaKnown RBP6.14□□□□□ -1.43
PTCD2-201ENST00000308077 KRT8P05787 483 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 CD8BP10966 210 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 NR2C1P13056 603 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 UGT2B10P36537 528 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 CAPZA2P47755 286 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 TGM4P49221 684 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 GDI2P50395 445 aaKnown RBP6.14□□□□□ -1.43
PTCD2-201ENST00000308077 ROM1Q03395 351 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 SLC3A1Q07837 685 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 KCNMB1Q16558 191 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 LINC00303Q3SY05 128 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 C22orf42Q6IC83 251 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 RPL22L1Q6P5R6 122 aaKnown RBP6.14□□□□□ -1.43
PTCD2-201ENST00000308077 GDPGP1Q6ZNW5 385 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 FAM220AQ7Z4H9 259 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 KCTD20Q7Z5Y7 419 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 FGD2Q7Z6J4 655 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF679Q8IYX0 411 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF454Q8N9F8 522 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 OR10H5Q8NGA6 315 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 OR13C5Q8NGS8 318 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 OR52N5Q8NH56 324 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 ASB17Q8WXJ9 295 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 INTS12Q96CB8 462 aaKnown RBP6.14□□□□□ -1.43
PTCD2-201ENST00000308077 SMIM19Q96E16 107 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 MAP6Q96JE9 813 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 ALKBH3Q96Q83 286 aaPredicted RBP6.14□□□□□ -1.43
PTCD2-201ENST00000308077 TTYH2Q9BSA4 534 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 HDHD5Q9BXW7 423 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 PRRG4Q9BZD6 226 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 CALHM2Q9HA72 323 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 ELOVL3Q9HB03 270 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 CLCF1Q9UBD9 225 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 SSR3Q9UNL2 185 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 NOSIPQ9Y314 301 aaKnown RBP6.14□□□□□ -1.43
PTCD2-201ENST00000308077 CACNA1DQ01668 2161 aa6.14□□□□□ -1.43
PTCD2-201ENST00000308077 NCOA6Q14686 2063 aaPredicted RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 MED12LQ86YW9 2145 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 SHISA3A0PJX4 238 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 SLC22A20A6NK97 555 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF724A8MTY0 619 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 GPR171O14626 319 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 SC5DO75845 299 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 FGF9P31371 208 aaPredicted RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 SERPINB10P48595 397 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 UCNP55089 124 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 RPS11P62280 158 aaKnown RBP eCLIP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 ENDOGQ14249 297 aaKnown RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 RNPS1Q15287 305 aaKnown RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 CCDC58Q4VC31 144 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 TSPO2Q5TGU0 170 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 OR7E24Q6IFN5 339 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 CFAP77Q6ZQR2 320 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 USP43Q70EL4 1123 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 CHMP1BQ7LBR1 199 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 NUFIP2Q7Z417 695 aaKnown RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 Q8NA96 180 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 OR5M9Q8NGP3 310 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 ZFAND2BQ8WV99 257 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 RGP1Q92546 391 aaPredicted RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 GHSRQ92847 366 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 PDCD1LG2Q9BQ51 273 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF416Q9BWM5 594 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 RBM24Q9BX46 236 aaKnown RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 NELFAQ9H3P2 528 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 OCEL1Q9H607 264 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 RNF122Q9H9V4 155 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 CRLF2Q9HC73 371 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF71Q9NQZ8 489 aaPredicted RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 FRRS1LQ9P0K9 344 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 GDF2Q9UK05 429 aaPredicted RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 FBXL3Q9UKT7 428 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 LRP12Q9Y561 859 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 FREM1Q5H8C1 2179 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 HIVEP3Q5T1R4 2406 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 TRBV2A0A0J9YWF9 115 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 MRPL33O75394 65 aaKnown RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 SRSF10O75494 262 aaKnown RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 RGS9O75916 674 aaPredicted RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 PNPP00491 289 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 IGHV3-9P01782 118 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 HLA-DPB1P04440 258 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 CD1AP06126 327 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 YES1P07947 543 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 INHBBP09529 407 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 TACSTD2P09758 323 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 CLEC2LP0C7M8 214 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms