RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 IFT27Q9BW83 186 aa22.61■■□□□ 1.21
CDKN2A-201ENST00000304494 NKIRAS2Q9NYR9 191 aa22.61■■□□□ 1.21
CDKN2A-201ENST00000304494 CDC42EP3Q9UKI2 254 aa22.61■■□□□ 1.21
CDKN2A-201ENST00000304494 MAGEA2P43356 314 aa22.6■■□□□ 1.21
CDKN2A-201ENST00000304494 HTR5AP47898 357 aa22.6■■□□□ 1.21
CDKN2A-201ENST00000304494 SPATA46Q5T0L3 261 aa22.6■■□□□ 1.21
CDKN2A-201ENST00000304494 MBNL2Q5VZF2 373 aaKnown RBP22.6■■□□□ 1.21
CDKN2A-201ENST00000304494 FAM166AQ6J272 317 aa22.6■■□□□ 1.21
CDKN2A-201ENST00000304494 PGM2L1Q6PCE3 622 aa22.6■■□□□ 1.21
CDKN2A-201ENST00000304494 SLC25A40Q8TBP6 338 aa22.6■■□□□ 1.21
CDKN2A-201ENST00000304494 HPS1Q92902 700 aa22.6■■□□□ 1.21
CDKN2A-201ENST00000304494 SNX18Q96RF0 628 aa22.6■■□□□ 1.21
CDKN2A-201ENST00000304494 TRIM15Q9C019 465 aa22.6■■□□□ 1.21
CDKN2A-201ENST00000304494 C1orf21Q9H246 121 aa22.6■■□□□ 1.21
CDKN2A-201ENST00000304494 LYVE1Q9Y5Y7 322 aa22.6■■□□□ 1.21
CDKN2A-201ENST00000304494 CHD3Q12873 2000 aaKnown RBP22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 LOC100289279A0A1B0GTE1 492 aa22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 TCRBV5S2A0A599 114 aa22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 TNFRSF11BO00300 401 aa22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 IDH3BO43837 385 aa22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 RENP00797 406 aa22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 T-ENOLP0DO92 83 aa22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 NOS3P29474 1203 aa22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 PPP1CBP62140 327 aa22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 KCNMB1Q16558 191 aa22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 PGBD2Q6P3X8 592 aa22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 RFPL4BQ6ZWI9 263 aa22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 KLF14Q8TD94 323 aaPredicted RBP22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 MSI2Q96DH6 328 aaKnown RBP22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 SAMD8Q96LT4 415 aa22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 OR2J1Q9GZK6 312 aa22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 PLEK2Q9NYT0 353 aa22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 ASH2LQ9UBL3 628 aa22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 LPAR3Q9UBY5 353 aa22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 KCNS2Q9ULS6 477 aa22.59■■□□□ 1.21
CDKN2A-201ENST00000304494 PLSCR5A0PG75 271 aa22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 LRP5LA4QPB2 252 aa22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 LMX1BO60663 402 aa22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 LILRA1O75019 489 aa22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 ABHD16AO95870 558 aa22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 COL8A2P25067 703 aa22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 MAGEB1P43366 347 aa22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 TMEM33P57088 247 aa22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 GLO1Q04760 184 aa22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 FAM98BQ52LJ0 330 aaKnown RBP22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 RPL13AP3Q6NVV1 102 aa22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 LEG1Q6P5S2 330 aa22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 ZNF620Q6ZNG0 422 aa22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 VASH1Q7L8A9 365 aaPredicted RBP22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 NPEPL1Q8NDH3 523 aa22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 IPCEF1Q8WWN9 437 aaPredicted RBP22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 CYSLTR2Q9NS75 346 aa22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 POLR1DQ9Y2S0 133 aa22.58■■□□□ 1.21
CDKN2A-201ENST00000304494 YLPM1P49750 1951 aaKnown RBP22.58■■□□□ 1.2
CDKN2A-201ENST00000304494 ABCA2Q9BZC7 2435 aa22.57■■□□□ 1.2
CDKN2A-201ENST00000304494 NCR1O76036 304 aa22.57■■□□□ 1.2
CDKN2A-201ENST00000304494 MPZL1O95297 269 aa22.57■■□□□ 1.2
CDKN2A-201ENST00000304494 HIST1H1CP16403 213 aaKnown RBP22.57■■□□□ 1.2
CDKN2A-201ENST00000304494 TUBG1P23258 451 aa22.57■■□□□ 1.2
CDKN2A-201ENST00000304494 LIPAP38571 399 aa22.57■■□□□ 1.2
CDKN2A-201ENST00000304494 MPV17P39210 176 aa22.57■■□□□ 1.2
CDKN2A-201ENST00000304494 GPR6P46095 362 aaPredicted RBP22.57■■□□□ 1.2
CDKN2A-201ENST00000304494 CENPAP49450 140 aa22.57■■□□□ 1.2
CDKN2A-201ENST00000304494 CCL8P80075 99 aa22.57■■□□□ 1.2
CDKN2A-201ENST00000304494 ASB9Q96DX5 294 aa22.57■■□□□ 1.2
CDKN2A-201ENST00000304494 LRGUKQ96M69 825 aa22.57■■□□□ 1.2
CDKN2A-201ENST00000304494 NMNAT3Q96T66 252 aa22.57■■□□□ 1.2
CDKN2A-201ENST00000304494 TUBG2Q9NRH3 451 aa22.57■■□□□ 1.2
CDKN2A-201ENST00000304494 DECR2Q9NUI1 292 aa22.57■■□□□ 1.2
CDKN2A-201ENST00000304494 TBCCD1Q9NVR7 557 aa22.57■■□□□ 1.2
CDKN2A-201ENST00000304494 CGGBP1Q9UFW8 167 aaPredicted RBP22.57■■□□□ 1.2
CDKN2A-201ENST00000304494 CCNB2O95067 398 aa22.56■■□□□ 1.2
CDKN2A-201ENST00000304494 NGFP01138 241 aa22.56■■□□□ 1.2
CDKN2A-201ENST00000304494 ZNF81P51508 661 aa22.56■■□□□ 1.2
CDKN2A-201ENST00000304494 TEKQ02763 1124 aa22.56■■□□□ 1.2
CDKN2A-201ENST00000304494 OR52L1Q8NGH7 329 aa22.56■■□□□ 1.2
CDKN2A-201ENST00000304494 YIPF5Q969M3 257 aa22.56■■□□□ 1.2
CDKN2A-201ENST00000304494 COG8Q96MW5 612 aa22.56■■□□□ 1.2
CDKN2A-201ENST00000304494 TSSK2Q96PF2 358 aa22.56■■□□□ 1.2
CDKN2A-201ENST00000304494 SRA1Q9HD15 236 aaKnown RBP22.56■■□□□ 1.2
CDKN2A-201ENST00000304494 ZNF275Q9NSD4 429 aaPredicted RBP22.56■■□□□ 1.2
CDKN2A-201ENST00000304494 FAM53CQ9NYF3 392 aa22.56■■□□□ 1.2
CDKN2A-201ENST00000304494 TAS2R1Q9NYW7 299 aa22.56■■□□□ 1.2
CDKN2A-201ENST00000304494 ATPIF1Q9UII2 106 aa22.56■■□□□ 1.2
CDKN2A-201ENST00000304494 B9D1Q9UPM9 204 aa22.56■■□□□ 1.2
CDKN2A-201ENST00000304494 SONP18583 2426 aaKnown RBP22.56■■□□□ 1.2
CDKN2A-201ENST00000304494 RTTNQ86VV8 2226 aa22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 IGLV1-36A0A0B4J1U3 117 aa22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 KIAA1324LA8MWY0 1029 aaPredicted RBP22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 TPD52L2O43399 206 aaKnown RBP22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 TGFAP01135 160 aa22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 IFNA2P01563 188 aa22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 GSTM3P21266 225 aa22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 MMP15P51511 669 aa22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 MS4A2Q01362 244 aa22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 TRIP10Q15642 601 aa22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 ZMAT1Q5H9K5 638 aa22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 OR6V1Q8N148 313 aa22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 OR9Q2Q8NGE9 314 aa22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 OR4C15Q8NGM1 316 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms