RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 PGAM5Q96HS1 289 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 PTTG3PQ9NZH4 202 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 PCDHGA9Q9Y5G4 932 aaKnown RBP12.72□□□□□ -0.37
SDC2-201ENST00000302190 K7EQS6 105 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 TRAPPC6AO75865 159 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 NKX2-2O95096 273 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 DRD1P21728 446 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 NPY4RP50391 375 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 TAS2R19P59542 299 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 GPR139Q6DWJ6 353 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 OR4D10Q8NGI6 311 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 ZNRF4Q8WWF5 429 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 CXorf58Q96LI9 332 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 CDX2Q99626 313 aaPredicted RBP12.72□□□□□ -0.37
SDC2-201ENST00000302190 PELOQ9BRX2 385 aaKnown RBP12.72□□□□□ -0.37
SDC2-201ENST00000302190 SLC2A4RGQ9NR83 387 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 A0A087WV62 115 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 TLX3O43711 291 aaPredicted RBP12.71□□□□□ -0.37
SDC2-201ENST00000302190 WDPCPO95876 746 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 AVPR2P30518 371 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 BIDP55957 195 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 ZNF616Q08AN1 781 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 PRTGQ2VWP7 1150 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 SLC25A30Q5SVS4 291 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 ZNF585AQ6P3V2 769 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 TRILQ7L0X0 811 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 DND1Q8IYX4 353 aaKnown RBP12.71□□□□□ -0.37
SDC2-201ENST00000302190 DEFB123Q8N688 67 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 ADAMTS18Q8TE60 1221 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 VRK1Q99986 396 aaPredicted RBP12.71□□□□□ -0.37
SDC2-201ENST00000302190 ROS1P08922 2347 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 A0A0A6YYH2 397 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 A6NJ64 397 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 KCNAB3O43448 404 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 ADAM11O75078 769 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 EFNB2P52799 333 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 CAPZA1P52907 286 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 CSNK2A1P68400 391 aaPredicted RBP12.71□□□□□ -0.37
SDC2-201ENST00000302190 RAET1LQ5VY80 246 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 MUC20Q8N307 709 aaPredicted RBP12.71□□□□□ -0.37
SDC2-201ENST00000302190 LRRC18Q8N456 261 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 CSNK2A3Q8NEV1 391 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 OR2AK2Q8NG84 335 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 TAAR8Q969N4 342 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 GHITMQ9H3K2 345 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 KLHDC2Q9Y2U9 406 aa12.71□□□□□ -0.37
SDC2-201ENST00000302190 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.71□□□□□ -0.38
SDC2-201ENST00000302190 SDCBPO00560 298 aaPredicted RBP12.71□□□□□ -0.38
SDC2-201ENST00000302190 TNFSF12O43508 249 aa12.71□□□□□ -0.38
SDC2-201ENST00000302190 SGCEO43556 437 aa12.71□□□□□ -0.38
SDC2-201ENST00000302190 FOSL2P15408 326 aa12.71□□□□□ -0.38
SDC2-201ENST00000302190 PRSS12P56730 875 aa12.71□□□□□ -0.38
SDC2-201ENST00000302190 MRPS10P82664 201 aaKnown RBP12.71□□□□□ -0.38
SDC2-201ENST00000302190 ABCA11PQ4W5N1 156 aa12.71□□□□□ -0.38
SDC2-201ENST00000302190 WDR38Q5JTN6 314 aa12.71□□□□□ -0.38
SDC2-201ENST00000302190 HACD4Q5VWC8 232 aa12.71□□□□□ -0.38
SDC2-201ENST00000302190 LILRB2Q8N423 598 aa12.71□□□□□ -0.38
SDC2-201ENST00000302190 C8orf44Q96CB5 159 aa12.71□□□□□ -0.38
SDC2-201ENST00000302190 PHB2Q99623 299 aa12.71□□□□□ -0.38
SDC2-201ENST00000302190 DEFB126Q9BYW3 111 aa12.71□□□□□ -0.38
SDC2-201ENST00000302190 SUSD2Q9UGT4 822 aa12.71□□□□□ -0.38
SDC2-201ENST00000302190 ASPMQ8IZT6 3477 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 LOC107986453A0A1B0GWG9 222 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 A0A1W2PNR3 127 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 GGT3PA6NGU5 568 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 F10P00742 488 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 ZP3P21754 424 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 CD38P28907 300 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 TNFRSF4P43489 277 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 DYRK1AQ13627 763 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 PWWP2BQ6NUJ5 590 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 CD200R1LQ6Q8B3 271 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 NPEPL1Q8NDH3 523 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 ANKRD9Q96BM1 317 aaPredicted RBP12.7□□□□□ -0.38
SDC2-201ENST00000302190 CHST6Q9GZX3 395 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 FGF21Q9NSA1 209 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 MRPS18AQ9NVS2 196 aaKnown RBP12.7□□□□□ -0.38
SDC2-201ENST00000302190 TICRRQ7Z2Z1 1910 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 TRAV1-2A0A0B4J238 106 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 CXorf51AA0A1B0GTR3 108 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 CYR61O00622 381 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 LDOC1O95751 146 aaPredicted RBP12.7□□□□□ -0.38
SDC2-201ENST00000302190 TMEM225BP0DP42 221 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 PPP3CBP16298 524 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 ZNF43P17038 809 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 SERPINA2P20848 420 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 GABRR1P24046 479 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 CHRFAM7AQ494W8 412 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 SPIN3Q5JUX0 258 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 CLRN3Q8NCR9 226 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 OR10R2Q8NGX6 335 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 MIB2Q96AX9 1013 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 TCTN2Q96GX1 697 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 DCBLD2Q96PD2 775 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 CDCA3Q99618 268 aaPredicted RBP12.7□□□□□ -0.38
SDC2-201ENST00000302190 FRRS1LQ9P0K9 344 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 NTMQ9P121 344 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 MRM2Q9UI43 246 aaKnown RBP12.7□□□□□ -0.38
SDC2-201ENST00000302190 NOSIPQ9Y314 301 aaKnown RBP12.7□□□□□ -0.38
SDC2-201ENST00000302190 LSM5Q9Y4Y9 91 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms