RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ZNF883P0CG24 379 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 UBE2NLQ5JXB2 153 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 GTPBP8Q8N3Z3 284 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-201ENST00000279247 NOXO1Q8NFA2 376 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 MCHR2Q969V1 340 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 COL25A1Q9BXS0 654 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-201ENST00000279247 OR52A1Q9UKL2 312 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 KMT2EQ8IZD2 1858 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 UBL3O95164 117 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 PGA4P0DJD7 388 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 PGA3P0DJD8 388 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 DDOSTP39656 456 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 CCR6P51684 374 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 TAF13Q15543 124 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 WIPI1Q5MNZ9 446 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-201ENST00000279247 LINC00696Q6ZRV3 163 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 LRRC18Q8N456 261 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 PRSS33Q8NF86 280 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 ZBTB8AQ96BR9 441 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 OXGR1Q96P68 337 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 SNX18Q96RF0 628 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 IL17BQ9UHF5 180 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 NCKAP5O14513 1909 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 A0A0J9YW62 118 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 LOC107986453A0A1B0GWG9 222 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 TNFRSF10AO00220 468 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 ETV2O00321 342 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-201ENST00000279247 LAP3P28838 519 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 GNALP38405 381 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 DSCR4P56555 118 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-201ENST00000279247 SSPNQ14714 243 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 TMEM69Q5SWH9 247 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 FAAP20Q6NZ36 180 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 OR6S1Q8NH40 331 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 SLC25A43Q8WUT9 341 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-201ENST00000279247 PHYHIPQ92561 330 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 YIPF5Q969M3 257 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 MIB2Q96AX9 1013 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 MRPL13Q9BYD1 178 aaKnown RBP15.95■□□□□ 0.14
CAPN1-201ENST00000279247 KLK11Q9UBX7 282 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 CACNG2Q9Y698 323 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 TNFSF15O95150 251 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 EFNB2P52799 333 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 SLC35A1P78382 337 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 ROM1Q03395 351 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 RSPO4Q2I0M5 234 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-201ENST00000279247 JAGN1Q8N5M9 183 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 DEFB124Q8NES8 71 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 ASB5Q8WWX0 329 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 FYTTD1Q96QD9 318 aaKnown RBP15.95■□□□□ 0.14
CAPN1-201ENST00000279247 HES7Q9BYE0 225 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 NUDT15Q9NV35 164 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 PLA2G3Q9NZ20 509 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 HDGFL3Q9Y3E1 203 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 ALG5Q9Y673 324 aa15.95■□□□□ 0.14
CAPN1-201ENST00000279247 A0A1W2PNV4 684 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 MEIS3P1A6NDR6 274 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 NPIPA2E9PIF3 369 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 NPIPA3F8WFD2 350 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 HLA-DQB1P01920 261 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 CYC1P08574 325 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 ITGA5P08648 1049 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 CDK2P24941 298 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 ITGA3P26006 1051 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 GIFP27352 417 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 PTGS2P35354 604 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 TEX30Q5JUR7 227 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 ASPHD2Q6ICH7 369 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 CATSPERDQ86XM0 798 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 DND1Q8IYX4 353 aaKnown RBP15.94■□□□□ 0.14
CAPN1-201ENST00000279247 ZNF454Q8N9F8 522 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 OR52I2Q8NH67 350 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 RBM24Q9BX46 236 aaKnown RBP15.94■□□□□ 0.14
CAPN1-201ENST00000279247 RANGRFQ9HD47 186 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-201ENST00000279247 DEPPQ9NTK1 212 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 GDF2Q9UK05 429 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-201ENST00000279247 CDV3Q9UKY7 258 aaKnown RBP15.94■□□□□ 0.14
CAPN1-201ENST00000279247 R4GMQ9 66 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 SPAARA0A1B0GVQ0 90 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 A0A1W2PQ72 361 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 AQP7P3A6NL99 342 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 CD2P06729 351 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 MAP2K6P52564 334 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 MRPL28Q13084 256 aaKnown RBP15.94■□□□□ 0.14
CAPN1-201ENST00000279247 CHAF1BQ13112 559 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 ATAD3CQ5T2N8 411 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 SFRP4Q6FHJ7 346 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-201ENST00000279247 OR10K2Q6IF99 312 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 KLHL24Q6TFL4 600 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 OR2AJ1Q8NGZ0 328 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 ADAMTS14Q8WXS8 1223 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 S100A16Q96FQ6 103 aaKnown RBP15.94■□□□□ 0.14
CAPN1-201ENST00000279247 ZCCHC4Q9H5U6 513 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 ZNF221Q9UK13 617 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 A6NL46 340 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 INMT-MINDY4F8WBC2 141 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 PTBP1P26599 531 aaKnown RBP eCLIP15.94■□□□□ 0.144e-7■■□□□ 12.9
CAPN1-201ENST00000279247 HSD11B1P28845 292 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 CYB561P49447 251 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 RIN1Q13671 783 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms