RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 TMEM54Q969K7 222 aa8.24□□□□□ -1.09
LRTM1-201ENST00000273286 TIMD4Q96H15 378 aa8.24□□□□□ -1.09
LRTM1-201ENST00000273286 TXNDC15Q96J42 360 aa8.24□□□□□ -1.09
LRTM1-201ENST00000273286 MAGEB18Q96M61 343 aa8.24□□□□□ -1.09
LRTM1-201ENST00000273286 MOGAT1Q96PD6 335 aa8.24□□□□□ -1.09
LRTM1-201ENST00000273286 RBM4Q9BWF3 364 aaKnown RBP8.24□□□□□ -1.09
LRTM1-201ENST00000273286 CDH20Q9HBT6 801 aa8.24□□□□□ -1.09
LRTM1-201ENST00000273286 HINT3Q9NQE9 182 aaKnown RBP8.24□□□□□ -1.09
LRTM1-201ENST00000273286 NANSQ9NR45 359 aa8.24□□□□□ -1.09
LRTM1-201ENST00000273286 CCDC167Q9P0B6 97 aa8.24□□□□□ -1.09
LRTM1-201ENST00000273286 ZNF229Q9UJW7 825 aa8.24□□□□□ -1.09
LRTM1-201ENST00000273286 IQCMA0A1B0GVH7 501 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 GMNCA6NCL1 334 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 FAM157AC9JC47 383 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 DHHO43323 396 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 TPST1O60507 370 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 RP2O75695 350 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 SERPINI2O75830 405 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 MFN2O95140 757 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 SPDEFO95238 335 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 IGHG1P01857 330 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 HIST1H2ABP04908 130 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 TCN1P20061 433 aaPredicted RBP8.23□□□□□ -1.09
LRTM1-201ENST00000273286 COL8A2P25067 703 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 CRYBB2P43320 205 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 ATP4BP51164 291 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 ZNF84P51523 738 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 SEC24CP53992 1094 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 AQP5P55064 265 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 LMO4P61968 165 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 MXRA7P84157 204 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 RAB39AQ14964 217 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 ZNF74Q16587 644 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 FAHD2BQ6P2I3 314 aaPredicted RBP8.23□□□□□ -1.09
LRTM1-201ENST00000273286 HIST3H2AQ7L7L0 130 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 ZNF584Q8IVC4 421 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 SKA3Q8IX90 412 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 MSRB3Q8IXL7 192 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 TSPEARQ8WU66 669 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 ASB10Q8WXI3 467 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 HIST1H2ACQ93077 130 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 FAHD2AQ96GK7 314 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 MCHR1Q99705 422 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 CCDC28BQ9BUN5 200 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 SUCNR1Q9BXA5 334 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 KCNN2Q9H2S1 579 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 RNF121Q9H920 327 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 TMEM38BQ9NVV0 291 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 VAPAQ9P0L0 249 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 TAAR3PQ9P1P4 343 aa8.23□□□□□ -1.09
LRTM1-201ENST00000273286 TRBV5-3A0A0A0MS03 114 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 IGHV1-69-2A0A0G2JMI3 117 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 TRAPPC13A5PLN9 417 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 CLDN25C9JDP6 229 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 C11orf98E9PRG8 122 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 RNF13O43567 381 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 SPRY1O43609 319 aaPredicted RBP8.22□□□□□ -1.09
LRTM1-201ENST00000273286 VENTXO95231 258 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 BCL10O95999 233 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 IGF2P01344 180 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 LCKP06239 509 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 PGA4P0DJD7 388 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 PGA3P0DJD8 388 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 AQP1P29972 269 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 LIPAP38571 399 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 ARFIP2P53365 341 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 UCP2P55851 309 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 RAP2BP61225 183 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 SLC3A1Q07837 685 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 MAD2L1BPQ15013 274 aaPredicted RBP8.22□□□□□ -1.09
LRTM1-201ENST00000273286 HFEQ30201 348 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 INTS11Q5TA45 600 aaKnown RBP8.22□□□□□ -1.09
LRTM1-201ENST00000273286 SLC16A14Q7RTX9 510 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 PATL1Q86TB9 770 aaKnown RBP8.22□□□□□ -1.09
LRTM1-201ENST00000273286 COMTD1Q86VU5 262 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 FUNDC1Q8IVP5 155 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 C3orf56Q8N813 242 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 ADAMTS16Q8TE57 1224 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 LINC00476Q8WZB0 136 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 RAB1CQ92928 201 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 RSPO3Q9BXY4 272 aaPredicted RBP8.22□□□□□ -1.09
LRTM1-201ENST00000273286 PCDHAC1Q9H158 963 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 NARFLQ9H6Q4 476 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 ZNF665Q9H7R5 613 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 SAP30LQ9HAJ7 183 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 SMURF2Q9HAU4 748 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 DECR2Q9NUI1 292 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 TAS2R5Q9NYW4 299 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 TREM2Q9NZC2 230 aa8.22□□□□□ -1.09
LRTM1-201ENST00000273286 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.22□□□□□ -1.09
LRTM1-201ENST00000273286 LEF1Q9UJU2 399 aaPredicted RBP8.22□□□□□ -1.09
LRTM1-201ENST00000273286 A0A1W2PRG6 482 aa8.21□□□□□ -1.09
LRTM1-201ENST00000273286 PLSCR5A0PG75 271 aa8.21□□□□□ -1.09
LRTM1-201ENST00000273286 TMEM89A2RUT3 159 aa8.21□□□□□ -1.09
LRTM1-201ENST00000273286 LRRN3E7EW58 273 aa8.21□□□□□ -1.09
LRTM1-201ENST00000273286 TPST2O60704 377 aa8.21□□□□□ -1.09
LRTM1-201ENST00000273286 CH25HO95992 272 aa8.21□□□□□ -1.09
LRTM1-201ENST00000273286 IGHV3-13P01766 116 aa8.21□□□□□ -1.09
LRTM1-201ENST00000273286 ASAH2BP0C7U1 165 aa8.21□□□□□ -1.09
LRTM1-201ENST00000273286 DRD4P21917 467 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms