RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 ZNF281Q9Y2X9 895 aa12.45□□□□□ -0.42
SS18-201ENST00000269137 LRP12Q9Y561 859 aa12.45□□□□□ -0.42
SS18-201ENST00000269137 OR14I1A6ND48 311 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 CD8B2A6NJW9 211 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 OR4C45A6NMZ5 311 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 WISP2O76076 250 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 ZFPL1O95159 310 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 TGM6O95932 706 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 WNT11O96014 354 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 CD8BP10966 210 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 DCTDP32321 178 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 RPS11P62280 158 aaKnown RBP eCLIP12.44□□□□□ -0.42
SS18-201ENST00000269137 INSL4Q14641 139 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 MOGQ16653 247 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 ACSM3Q53FZ2 586 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 YIF1BQ5BJH7 314 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 FAM27BQ5VT28 67 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 PLXDC2Q6UX71 529 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 PAMR1Q6UXH9 720 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 TEX19Q8NA77 164 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 PHYHIPQ92561 330 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 EXTL1Q92935 676 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 SLAMF6Q96DU3 332 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 ZNF837Q96EG3 531 aaPredicted RBP12.44□□□□□ -0.42
SS18-201ENST00000269137 C4orf45Q96LM5 186 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 PDCD1LG2Q9BQ51 273 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 ZNF416Q9BWM5 594 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 NXF2Q9GZY0 626 aaKnown RBP12.44□□□□□ -0.42
SS18-201ENST00000269137 SLCO5A1Q9H2Y9 848 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 ASH2LQ9UBL3 628 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 SVILO95425 2214 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 FREM1Q5H8C1 2179 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 A0A087WV48 116 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 TMEM212A6NML5 194 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 GATBO75879 557 aaKnown RBP12.44□□□□□ -0.42
SS18-201ENST00000269137 CDRT1O95170 752 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 SOX6P35712 828 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 ZNF544Q6NX49 715 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 UNQ9370/PRO34162Q6UXP9 181 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 SPATC1Q76KD6 591 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 LINGO2Q7L985 606 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 CEACAM19Q7Z692 300 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 OR10S1Q8NGN2 331 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 MMP27Q9H306 513 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 CALHM2Q9HA72 323 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 GPR35Q9HC97 309 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 GLRX2Q9NS18 164 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 TMEM38BQ9NVV0 291 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 CLCF1Q9UBD9 225 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 TP53TG5Q9Y2B4 290 aa12.44□□□□□ -0.42
SS18-201ENST00000269137 PIEZO2Q9H5I5 2752 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 ARPC4-TTLL3A0A0A6YYG9 625 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 RPL36A-HNRNPH2H7BZ11 118 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 SRSF10O75494 262 aaKnown RBP12.43□□□□□ -0.42
SS18-201ENST00000269137 H2BFMP0C1H6 154 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 SDC2P34741 201 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 HIST1H3AP68431 136 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 GTF3C1Q12789 2109 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 ENDOGQ14249 297 aaKnown RBP12.43□□□□□ -0.42
SS18-201ENST00000269137 ZNF829Q3KNS6 432 aaPredicted RBP12.43□□□□□ -0.42
SS18-201ENST00000269137 ZNF404Q494X3 552 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 NRN1LQ496H8 165 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 HIST2H3PS2Q5TEC6 136 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 TSPO2Q5TGU0 170 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 OR7E24Q6IFN5 339 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 CFAP77Q6ZQR2 320 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 HIST2H3AQ71DI3 136 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 MED12LQ86YW9 2145 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.43□□□□□ -0.42
SS18-201ENST00000269137 PRSS35Q8N3Z0 413 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 OR5AK2Q8NH90 309 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 SLC25A46Q96AG3 418 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 ALKBH3Q96Q83 286 aaPredicted RBP12.43□□□□□ -0.42
SS18-201ENST00000269137 NIPAL2Q9H841 368 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 CENPMQ9NSP4 180 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 CLEC4AQ9UMR7 237 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 R4GMQ9 66 aa12.43□□□□□ -0.42
SS18-201ENST00000269137 CHD8Q9HCK8 2581 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 A0A1B0GTH9 108 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 AHRRA9YTQ3 701 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 ZNF878C9JN71 531 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 PNPP00491 289 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 KIR3DL2P43630 455 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 MTNR1BP49286 362 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 RORCP51449 518 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 MMP16P51512 607 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 ZMAT1Q5H9K5 638 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 CATSPERDQ86XM0 798 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 GJC3Q8NFK1 279 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 IL17RDQ8NFM7 739 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 MCFD2Q8NI22 146 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 HTRA1Q92743 480 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 BORCS5Q969J3 196 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 APH1AQ96BI3 265 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 GMPPAQ96IJ6 420 aaPredicted RBP12.42□□□□□ -0.42
SS18-201ENST00000269137 PPIL3Q9H2H8 161 aaKnown RBP12.42□□□□□ -0.42
SS18-201ENST00000269137 PNRC2Q9NPJ4 139 aaKnown RBP12.42□□□□□ -0.42
SS18-201ENST00000269137 SLC7A10Q9NS82 523 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 SNTG1Q9NSN8 517 aa12.42□□□□□ -0.42
SS18-201ENST00000269137 BOD1L1Q8NFC6 3051 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms