RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 OR10S1Q8NGN2 331 aa19.93■□□□□ 0.78
UFD1-201ENST00000263202 RNF133Q8WVZ7 376 aa19.93■□□□□ 0.78
UFD1-201ENST00000263202 RNF166Q96A37 237 aaPredicted RBP19.93■□□□□ 0.78
UFD1-201ENST00000263202 MROQ9BYG7 248 aa19.93■□□□□ 0.78
UFD1-201ENST00000263202 GADD45AP24522 165 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 PSMB10P40306 273 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 PER3P56645 1201 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 ARF1P84077 181 aaKnown RBP19.92■□□□□ 0.78
UFD1-201ENST00000263202 ABHD12BQ7Z5M8 362 aaPredicted RBP19.92■□□□□ 0.78
UFD1-201ENST00000263202 SLAMF6Q96DU3 332 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 DOK1Q99704 481 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 SH3GL3Q99963 347 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 ELOVL3Q9HB03 270 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 ST6GALNAC2Q9UJ37 374 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 CACNA1CQ13936 2221 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 LRRTM2O43300 516 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 TNFSF13O75888 250 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 CRHP06850 196 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 NR4A1P22736 598 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 RBPJQ06330 500 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 AQP6Q13520 282 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 NRN1LQ496H8 165 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 C9orf135Q5VTT2 229 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 ZNF813Q6ZN06 617 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 ZNF627Q7L945 461 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 FBXO17Q96EF6 278 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 SF3B6Q9Y3B4 125 aaKnown RBP19.92■□□□□ 0.78
UFD1-201ENST00000263202 LRP12Q9Y561 859 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 ITPR1Q14643 2758 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 PKD1L2Q7Z442 2459 aa19.92■□□□□ 0.78
UFD1-201ENST00000263202 HSPB2A8KAH6 182 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 ZNF701M0R085 212 aaPredicted RBP19.91■□□□□ 0.78
UFD1-201ENST00000263202 RER1O15258 196 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 OGG1O15527 345 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 RPP14O95059 124 aaKnown RBP19.91■□□□□ 0.78
UFD1-201ENST00000263202 GABARAPO95166 117 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 IL2RAP01589 272 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 CST2P09228 141 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 TMIGD3P0DMS9 266 aaPredicted RBP19.91■□□□□ 0.78
UFD1-201ENST00000263202 HIST1H3AP68431 136 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 GPR50Q13585 617 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 HSPB2Q16082 182 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 CCDC58Q4VC31 144 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 HIST2H3PS2Q5TEC6 136 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 KLHL24Q6TFL4 600 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 HIST2H3AQ71DI3 136 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 NAXEQ8NCW5 288 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 RAB2BQ8WUD1 216 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 RPL3LQ92901 407 aaKnown RBP19.91■□□□□ 0.78
UFD1-201ENST00000263202 WBP1Q96G27 269 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 ZFP3Q96NJ6 502 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 PLSCR4Q9NRQ2 329 aa19.91■□□□□ 0.78
UFD1-201ENST00000263202 PLPP2O43688 288 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 GLI4P10075 376 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 OPRL1P41146 370 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 TGM4P49221 684 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 CTF1Q16619 201 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 EIF2S3LQ2VIR3 472 aaKnown RBP19.9■□□□□ 0.78
UFD1-201ENST00000263202 DMKNQ6E0U4 476 aaPredicted RBP19.9■□□□□ 0.78
UFD1-201ENST00000263202 OR7E24Q6IFN5 339 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 DEGS2Q6QHC5 323 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 BTLAQ7Z6A9 289 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 C12orf43Q96C57 262 aaKnown RBP19.9■□□□□ 0.78
UFD1-201ENST00000263202 OR51E2Q9H255 320 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 PNRC2Q9NPJ4 139 aaKnown RBP19.9■□□□□ 0.78
UFD1-201ENST00000263202 CENPMQ9NSP4 180 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 TINAGQ9UJW2 476 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 SHANK1Q9Y566 2161 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 H3BMQ9 156 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 ZNF254O75437 659 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 ITGA5P08648 1049 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 MPGP29372 298 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 CEACAM8P31997 349 aaPredicted RBP19.9■□□□□ 0.78
UFD1-201ENST00000263202 RIDAP52758 137 aaKnown RBP19.9■□□□□ 0.78
UFD1-201ENST00000263202 MRPL28Q13084 256 aaKnown RBP19.9■□□□□ 0.78
UFD1-201ENST00000263202 CDK5R1Q15078 307 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 RPL22L1Q6P5R6 122 aaKnown RBP19.9■□□□□ 0.78
UFD1-201ENST00000263202 RHOUQ7L0Q8 258 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 SKA3Q8IX90 412 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 GJC3Q8NFK1 279 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 HAVCR2Q8TDQ0 301 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 HSD17B8Q92506 261 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 STARD4Q96DR4 205 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 CNTNAP3BQ96NU0 1288 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 CNTNAP3Q9BZ76 1288 aa19.9■□□□□ 0.78
UFD1-201ENST00000263202 ACACBO00763 2458 aa19.89■□□□□ 0.77
UFD1-201ENST00000263202 MAP1BP46821 2468 aaKnown RBP19.89■□□□□ 0.77
UFD1-201ENST00000263202 INTS1Q8N201 2190 aaKnown RBP19.89■□□□□ 0.77
UFD1-201ENST00000263202 NOL3O60936 208 aaKnown RBP19.89■□□□□ 0.77
UFD1-201ENST00000263202 CGAP01215 116 aa19.89■□□□□ 0.77
UFD1-201ENST00000263202 H2BFMP0C1H6 154 aa19.89■□□□□ 0.77
UFD1-201ENST00000263202 GABRA5P31644 462 aa19.89■□□□□ 0.77
UFD1-201ENST00000263202 NANOS3P60323 173 aaKnown RBP19.89■□□□□ 0.77
UFD1-201ENST00000263202 RPS25P62851 125 aaKnown RBP19.89■□□□□ 0.77
UFD1-201ENST00000263202 ARL9Q6T311 187 aa19.89■□□□□ 0.77
UFD1-201ENST00000263202 RPS4Y2Q8TD47 263 aa19.89■□□□□ 0.77
UFD1-201ENST00000263202 ZNF878C9JN71 531 aa19.88■□□□□ 0.77
UFD1-201ENST00000263202 AIREO43918 545 aa19.88■□□□□ 0.77
UFD1-201ENST00000263202 FARS2O95363 451 aaKnown RBP19.88■□□□□ 0.77
UFD1-201ENST00000263202 CNOT4O95628 575 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms