RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 RASL10BQ96S79 203 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 FXYD6Q9H0Q3 95 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 TAS2R5Q9NYW4 299 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 RHCGQ9UBD6 479 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 A4GNTQ9UNA3 340 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 FAAHO00519 579 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 IMPA2O14732 288 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 GPR37O15354 613 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 GKN3PP0CG01 181 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 CD79BP40259 229 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 ZNF136P52737 540 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 DGCR2P98153 550 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 ZNF626Q68DY1 528 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 APOOLQ6UXV4 268 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 B3GLCTQ6Y288 498 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 NAA40Q86UY6 237 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 TRMT10AQ8TBZ6 339 aaKnown RBP17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 DNAJB12Q9NXW2 375 aaKnown RBP17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 OPN4Q9UHM6 478 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 RASD1Q9Y272 281 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 MPDZO75970 2070 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 NGFRP08138 427 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 MTNR1AP48039 350 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 FBXW4P57775 412 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 AP3S2P59780 193 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 SPCS3P61009 180 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 PIN1Q13526 163 aaPredicted RBP17■□□□□ 0.31
COL4A3BP-201ENST00000261415 ACER2Q5QJU3 275 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 DCST1Q5T197 706 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 FNDC7Q5VTL7 733 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 ASB13Q8WXK3 278 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 SLC39A7Q92504 469 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 PRRC1Q96M27 445 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 IP6K3Q96PC2 410 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 CTPS2Q9NRF8 586 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 ZNF629Q9UEG4 869 aaPredicted RBP17■□□□□ 0.31
COL4A3BP-201ENST00000261415 ZFHX4Q86UP3 3567 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 PIEZO1Q92508 2521 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 A0A1B0GVC2 190 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 A6NIN4 97 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 OR10H3O60404 316 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 CSTAP01040 98 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 SERPINA7P05543 415 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 IGFBP1P08833 259 aaPredicted RBP17■□□□□ 0.31
COL4A3BP-201ENST00000261415 PRG2P13727 222 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 HTR2AP28223 471 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 SLC1A3P43003 542 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 CCR9P51686 369 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 RAB4BP61018 213 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 CHAF1BQ13112 559 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 CD226Q15762 336 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 LIN54Q6MZP7 749 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 SFXN4Q6P4A7 337 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 IL20RBQ6UXL0 311 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 NR2C2APQ86WQ0 139 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 GATSQ8NAP1 163 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 OR10A4Q9H209 315 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 FLVCR2Q9UPI3 526 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 SLC35A3Q9Y2D2 325 aa17■□□□□ 0.31
COL4A3BP-201ENST00000261415 IGF2P01344 180 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 SPINK2P20155 84 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 PAX6P26367 422 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 ADH7P40394 386 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 NDUFAF6Q330K2 333 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 RANBP3LQ86VV4 465 aaPredicted RBP16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 MISPQ8IVT2 679 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 POGLUT1Q8NBL1 392 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 HAVCR2Q8TDQ0 301 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 SMAP2Q8WU79 429 aaPredicted RBP16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 PHYHIPLQ96FC7 376 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 ZFP3Q96NJ6 502 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 MCHR1Q99705 422 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 MFFQ9GZY8 342 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 KLHL1Q9NR64 748 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 CAMK2AQ9UQM7 478 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 NTNG1Q9Y2I2 539 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 TRBV4-1A0A0J9YWV2 114 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 CPSF4LA6NMK7 179 aaKnown RBP16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 KRT33AO76009 404 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 AKR7A3O95154 331 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 FBXO45P0C2W1 286 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 TAS2R60P59551 318 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 EFNB1P98172 346 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 SRSF6Q13247 344 aaKnown RBP16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 RBMS2Q15434 407 aaKnown RBP16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 SSX2Q16385 188 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 ENTPD8Q5MY95 495 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 DCAF10Q5QP82 559 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 RPS19BP1Q86WX3 136 aaKnown RBP16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 ARSGQ96EG1 525 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 RTN4RQ9BZR6 473 aa16.99■□□□□ 0.31
COL4A3BP-201ENST00000261415 A0A1W2PQD3 144 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 ALG1L2C9J202 215 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 FADS1O60427 444 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 H1F0P07305 194 aaKnown RBP16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 CBR1P16152 277 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 LAP3P28838 519 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 TAS2R41P59536 307 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 BLOC1S1P78537 153 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 BDH1Q02338 343 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms