RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 TRPC4Q9UBN4 977 aa11.77□□□□□ -0.53
MSH2-201ENST00000233146 PLXND1Q9Y4D7 1925 aa11.77□□□□□ -0.53
MSH2-201ENST00000233146 CEP350Q5VT06 3117 aa11.77□□□□□ -0.53
MSH2-201ENST00000233146 OR13C7P0DN81 318 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 CHATP28329 748 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 EFEMP1Q12805 493 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 EBPQ15125 230 aaKnown RBP11.76□□□□□ -0.53
MSH2-201ENST00000233146 CFAP52Q8N1V2 620 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 FBXO22Q8NEZ5 403 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 SEH1LQ96EE3 360 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 SLC6A7Q99884 636 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 NELFAQ9H3P2 528 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 UNC119BA6NIH7 251 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 ZNF432O94892 652 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 CSTBP04080 98 aaKnown RBP11.76□□□□□ -0.53
MSH2-201ENST00000233146 RPLP2P05387 115 aaKnown RBP11.76□□□□□ -0.53
MSH2-201ENST00000233146 CD82P27701 267 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 NTSP30990 170 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 B4GALNT1Q00973 533 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 PAX5Q02548 391 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 HSPB3Q12988 150 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 TMPRSS12Q86WS5 348 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 ADPRHL1Q8NDY3 354 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 BHLHE23Q8NDY6 225 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 OR52L1Q8NGH7 329 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 Q9N2J8 555 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 DMRT3Q9NQL9 472 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 SLC2A8Q9NY64 477 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 GNG8Q9UK08 70 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 ZNF223Q9UK11 482 aaPredicted RBP11.76□□□□□ -0.53
MSH2-201ENST00000233146 SH2B3Q9UQQ2 575 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 TSPAN2O60636 221 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 DUS4LO95620 317 aaKnown RBP11.76□□□□□ -0.53
MSH2-201ENST00000233146 CST4P01036 141 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 PGA3P0DJD8 388 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 PNLIPP16233 465 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 BRS3P32247 399 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 ELOCQ15369 112 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 FAHD2BQ6P2I3 314 aaPredicted RBP11.76□□□□□ -0.53
MSH2-201ENST00000233146 TIPARPQ7Z3E1 657 aaKnown RBP11.76□□□□□ -0.53
MSH2-201ENST00000233146 TMEM173Q86WV6 379 aaPredicted RBP11.76□□□□□ -0.53
MSH2-201ENST00000233146 OR9K2Q8NGE7 335 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 FAHD2AQ96GK7 314 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 FAM210BQ96KR6 192 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 PARD6GQ9BYG4 376 aaPredicted RBP11.76□□□□□ -0.53
MSH2-201ENST00000233146 OR52A1Q9UKL2 312 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 PIN4Q9Y237 131 aaKnown RBP11.76□□□□□ -0.53
MSH2-201ENST00000233146 NTNG1Q9Y2I2 539 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 URGCP-MRPS24S4R325 110 aa11.76□□□□□ -0.53
MSH2-201ENST00000233146 TSPAN11A1L157 253 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 RAB27BO00194 218 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 FUT5Q11128 374 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 SOHLH1Q5JUK2 328 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 C1orf194Q5T5A4 169 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 AGTRAPQ6RW13 159 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 BTNL3Q6UXE8 466 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 SLCO4C1Q6ZQN7 724 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 GDF7Q7Z4P5 450 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 C17orf64Q86WR6 236 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 OR2L13Q8N349 312 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 ARL14Q8N4G2 192 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 SUN3Q8TAQ9 357 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 CASTOR1Q8WTX7 329 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 TAAR8Q969N4 342 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 PADI1Q9ULC6 663 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 NLRC5Q86WI3 1866 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 KIR2DL5BA0A0G2JN68 375 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 KIR2DL5BA0A0G2JPC4 375 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 SRPX2O60687 465 aaPredicted RBP11.75□□□□□ -0.53
MSH2-201ENST00000233146 OR2T7P0C7T2 308 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 MED25Q71SY5 747 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 SLC35D2Q76EJ3 337 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 KLHDC8AQ8IYD2 350 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 KIR2DL5AQ8N109 375 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 ZNF615Q8N8J6 731 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 OR2T27Q8NH04 317 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 SNX22Q96L94 193 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 CNN2Q99439 309 aaKnown RBP11.75□□□□□ -0.53
MSH2-201ENST00000233146 NKX3-1Q99801 234 aaPredicted RBP11.75□□□□□ -0.53
MSH2-201ENST00000233146 MENTQ9BUN1 341 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 CNTNAP3Q9BZ76 1288 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 GPR173Q9NS66 373 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 GRHPRQ9UBQ7 328 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 A0A1W2PN81 502 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 HSBP1L1C9JCN9 74 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 H3BRB1 525 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 EFSO43281 561 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 GYPBP06028 91 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 IL6RP08887 468 aaPredicted RBP11.75□□□□□ -0.53
MSH2-201ENST00000233146 IRF2P14316 349 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 SELEP16581 610 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 FUT1P19526 365 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 LMO1P25800 156 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 CHRNA7P36544 502 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 TAGLN2P37802 199 aaKnown RBP11.75□□□□□ -0.53
MSH2-201ENST00000233146 CHRFAM7AQ494W8 412 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 OR4S1Q8NGB4 309 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 ZNF563Q8TA94 476 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 FGF13Q92913 245 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 MRGPRFQ96AM1 343 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms