RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 NID1P14543 1247 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 CXCL12P48061 93 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 AP3S2P59780 193 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 TPBGQ13641 420 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 SURF2Q15527 256 aaPredicted RBP9.61□□□□□ -0.87
VPS18-201ENST00000220509 CDNFQ49AH0 187 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 PTCRAQ6ISU1 281 aaPredicted RBP9.61□□□□□ -0.87
VPS18-201ENST00000220509 SFTPA2Q8IWL1 248 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 OR2T4Q8NH00 348 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 RAB3CQ96E17 227 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 TCTN2Q96GX1 697 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 FCRL1Q96LA6 429 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 HIPK2Q9H2X6 1198 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 FN3KQ9H479 309 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 TESQ9UGI8 421 aaKnown RBP9.61□□□□□ -0.87
VPS18-201ENST00000220509 PLXNA3P51805 1871 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 TMEM72A0PK05 275 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 IFNA6P05013 189 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 THBS1P07996 1170 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 SLC35E2P0CK97 266 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 SLC6A9P48067 706 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 SORDQ00796 357 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 HBMQ6B0K9 141 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 TMEM225Q6GV28 225 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 METAP1DQ6UB28 335 aaPredicted RBP9.61□□□□□ -0.87
VPS18-201ENST00000220509 TMEM99Q8N816 258 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 OR2AJ1Q8NGZ0 328 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 OR56B4Q8NH76 319 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 BAHD1Q8TBE0 780 aaPredicted RBP9.61□□□□□ -0.87
VPS18-201ENST00000220509 WNT2BQ93097 391 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 PACRGQ96M98 296 aaPredicted RBP9.61□□□□□ -0.87
VPS18-201ENST00000220509 LPAR4Q99677 370 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 HINT3Q9NQE9 182 aaKnown RBP9.61□□□□□ -0.87
VPS18-201ENST00000220509 KLK11Q9UBX7 282 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 C19orf53Q9UNZ5 99 aaPredicted RBP9.61□□□□□ -0.87
VPS18-201ENST00000220509 TRANK1O15050 2925 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 P2RX6O15547 441 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 LINC00614P0C842 121 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 ZNF41P51814 821 aaPredicted RBP9.61□□□□□ -0.87
VPS18-201ENST00000220509 GFERP55789 205 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 PKIAP61925 76 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 PPP1CAP62136 330 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 E2F1Q01094 437 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 ARL6IP1Q15041 203 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 CARD17Q5XLA6 110 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 OGFOD3Q6PK18 319 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 SLC22A25Q6T423 547 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 NDUFAF7Q7L592 441 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 THNSL2Q86YJ6 484 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 ADPRHL1Q8NDY3 354 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 OR10A7Q8NGE5 316 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 OR10K1Q8NGX5 313 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 OR6K3Q8NGY3 331 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 LGALS14Q8TCE9 139 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 ADAMTS18Q8TE60 1221 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 TMEM234Q8WY98 164 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 RRNAD1Q96FB5 475 aaKnown RBP9.61□□□□□ -0.87
VPS18-201ENST00000220509 THOC3Q96J01 351 aaKnown RBP9.61□□□□□ -0.87
VPS18-201ENST00000220509 BMFQ96LC9 184 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 NMNAT3Q96T66 252 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 ARHGAP9Q9BRR9 750 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 ADAT1Q9BUB4 502 aaKnown RBP9.61□□□□□ -0.87
VPS18-201ENST00000220509 CHRDQ9H2X0 955 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 UBE2ZQ9H832 354 aaPredicted RBP9.61□□□□□ -0.87
VPS18-201ENST00000220509 UBQLN4Q9NRR5 601 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 RARRES3Q9UL19 164 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 HS3ST3A1Q9Y663 406 aa9.61□□□□□ -0.87
VPS18-201ENST00000220509 A0A0U1RQV5 110 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 TLX3O43711 291 aaPredicted RBP9.6□□□□□ -0.87
VPS18-201ENST00000220509 FARS2O95363 451 aaKnown RBP9.6□□□□□ -0.87
VPS18-201ENST00000220509 DCNP07585 359 aaKnown RBP9.6□□□□□ -0.87
VPS18-201ENST00000220509 CELA2BP08218 269 aaPredicted RBP9.6□□□□□ -0.87
VPS18-201ENST00000220509 SNRNP70P08621 437 aaKnown RBP9.6□□□□□ -0.87
VPS18-201ENST00000220509 AQP2P41181 271 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 KIR2DL1P43626 348 aaPredicted RBP9.6□□□□□ -0.87
VPS18-201ENST00000220509 ACTA2P62736 377 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 ACTG2P63267 376 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 SQSTM1Q13501 440 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 GAB4Q2WGN9 574 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 YOD1Q5VVQ6 348 aaPredicted RBP9.6□□□□□ -0.87
VPS18-201ENST00000220509 MED25Q71SY5 747 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 ZNF595Q8IYB9 648 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 ZNF440Q8IYI8 595 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 OR6N1Q8NGY5 312 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 S100A16Q96FQ6 103 aaKnown RBP9.6□□□□□ -0.87
VPS18-201ENST00000220509 PRRG4Q9BZD6 226 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 BCL2L10Q9HD36 194 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 SIRT3Q9NTG7 399 aaPredicted RBP9.6□□□□□ -0.87
VPS18-201ENST00000220509 ASF1BQ9NVP2 202 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 EPHA6Q9UF33 1036 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 A4GNTQ9UNA3 340 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 MRPS2Q9Y399 296 aaKnown RBP9.6□□□□□ -0.87
VPS18-201ENST00000220509 CEP250Q9BV73 2442 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 SPINT1O43278 529 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 GALR3O60755 368 aaPredicted RBP9.6□□□□□ -0.87
VPS18-201ENST00000220509 ANKRD34CP0C6C1 535 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 MYF5P13349 255 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 PTH2RP49190 550 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 RAB5CP51148 216 aa9.6□□□□□ -0.87
VPS18-201ENST00000220509 OR1D5P58170 312 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms