RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 KRT77Q7Z794 578 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 APCDD1LQ8NCL9 501 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 MIB2Q96AX9 1013 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 CHRNA10Q9GZZ6 450 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 EXO5Q9H790 373 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 PLEKHA1Q9HB21 404 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 ZNF230Q9UIE0 474 aaPredicted RBP11.79□□□□□ -0.52
CTNS-201ENST00000046640 FBXL3Q9UKT7 428 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 TRBV11-1A0A0K0K1C0 115 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 BET1O15155 118 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 EIF4E2O60573 245 aaKnown RBP11.78□□□□□ -0.52
CTNS-201ENST00000046640 CD3DP04234 171 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 PRKACAP17612 351 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 EIF2B1Q14232 305 aaKnown RBP11.78□□□□□ -0.52
CTNS-201ENST00000046640 ATXN7L3Q14CW9 347 aaPredicted RBP11.78□□□□□ -0.52
CTNS-201ENST00000046640 SGCBQ16585 318 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 NKAIN1Q4KMZ8 207 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 B3GNTL1Q67FW5 361 aaPredicted RBP11.78□□□□□ -0.52
CTNS-201ENST00000046640 SEZ6L2Q6UXD5 910 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 HLA-CQ95604 372 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 PFDN2Q9UHV9 154 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 SESN1Q9Y6P5 492 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 M0QYG6 137 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 PLPP3O14495 311 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 SCRG1O75711 98 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 TPPPO94811 219 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 GLSO94925 669 aaPredicted RBP11.78□□□□□ -0.52
CTNS-201ENST00000046640 APOC3P02656 99 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 CCL7P80098 99 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 EMC4Q5J8M3 183 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 ELFN2Q5R3F8 820 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 RGS7BPQ6MZT1 257 aaPredicted RBP11.78□□□□□ -0.52
CTNS-201ENST00000046640 LRFN4Q6PJG9 635 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 ZNF627Q7L945 461 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 GRINAQ7Z429 371 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 LRRTM1Q86UE6 522 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 GPR148Q8TDV2 347 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 CCNL2Q96S94 520 aaPredicted RBP11.78□□□□□ -0.52
CTNS-201ENST00000046640 ZDBF2Q9HCK1 2354 aa11.78□□□□□ -0.52
CTNS-201ENST00000046640 IGKV1D-43A0A0B4J1Z2 117 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 A0A1W2PQM1 296 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 OR2M5A3KFT3 312 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 MFSD2BA6NFX1 497 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 PCP4L1A6NKN8 68 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 F5H5P2 479 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 RAB40ALP0C0E4 278 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 ACHEP22303 614 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 STARD6P59095 220 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 IKZF1Q13422 519 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 PAPD4Q6PIY7 484 aaKnown RBP11.77□□□□□ -0.52
CTNS-201ENST00000046640 C17orf107Q6ZR85 190 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 Q7L0L9 218 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 ZNF441Q8N8Z8 693 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 RAB40AQ8WXH6 277 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 DNASE2BQ8WZ79 361 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 NKD1Q969G9 470 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 WBP1Q96G27 269 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 MICU1Q9BPX6 476 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 ATG5Q9H1Y0 275 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 KLRF1Q9NZS2 232 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 OPN4Q9UHM6 478 aa11.77□□□□□ -0.52
CTNS-201ENST00000046640 FARSAQ9Y285 508 aaKnown RBP11.77□□□□□ -0.52
CTNS-201ENST00000046640 SLC22A23A1A5C7 686 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 TO15178 435 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 PLATP00750 562 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 C4BPBP20851 252 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 POU3F4P49335 361 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 POU3F1Q03052 451 aaPredicted RBP11.77□□□□□ -0.53
CTNS-201ENST00000046640 TMEM205Q6UW68 189 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 GSG1LQ6UXU4 331 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 ANKRD37Q7Z713 158 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 BIVMQ86UB2 503 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 ZNF227Q86WZ6 799 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 SPICQ8N5J4 248 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 RPS4Y2Q8TD47 263 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 C4orf45Q96LM5 186 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 C5orf34Q96MH7 638 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 DCBLD2Q96PD2 775 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 MNTQ99583 582 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 ABHD6Q9BV23 337 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 TXNIPQ9H3M7 391 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 ZNF768Q9H5H4 540 aaKnown RBP11.77□□□□□ -0.53
CTNS-201ENST00000046640 CENPMQ9NSP4 180 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 KIF25Q9UIL4 384 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 GPR160Q9UJ42 338 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 FBXO4Q9UKT5 387 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 K7ESF4 209 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 DLX5P56178 289 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 SLC17A1Q14916 467 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 OR10K2Q6IF99 312 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 ATRAIDQ6UW56 229 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 ZNF454Q8N9F8 522 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 ZNF519Q8TB69 540 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 SHDQ96IW2 340 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 OR8B4Q96RC9 309 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 CHRDQ9H2X0 955 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 PRDM6Q9NQX0 595 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 EMC9Q9Y3B6 208 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 TMEM14AQ9Y6G1 99 aa11.77□□□□□ -0.53
CTNS-201ENST00000046640 TRBV5-5A0A0J9YX44 114 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms