RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Tmbim7Q9D592 302 aa13.55□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Vmn1r100Q9EPS5 307 aa13.55□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Wdr54Q9R0D8 334 aa13.55□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 AI182371A2AS37 356 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Vmn2r108E9PYS0 855 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Oosp3G5E8D7 195 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Bet1O35623 118 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Prph2P15499 346 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Pax2P32114 414 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Rpl18P35980 188 aaKnown RBP13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 ArsbP50429 534 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Heatr6Q6P1G0 1184 aaKnown RBP13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 ArsjQ8BM89 598 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Olfr1100Q8VFM1 321 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Adarb1Q91ZS8 711 aaKnown RBP13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Elovl7Q9D2Y9 281 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 SigirrQ9JLZ8 409 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Ankrd31A0A140LI88 1765 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 BC049352E9Q2Z6 85 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 5730507C01RikJ3QPX0 416 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 RrhO35214 337 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Tacr3P47937 452 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Rab3cP62823 227 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Smad2Q62432 467 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Azgp1Q64726 307 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Cypt4Q6P925 153 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Olfr429Q7TRW1 312 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Adamtsl2Q7TSK7 957 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Zfp874aQ8BX23 447 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Smim14Q91VT8 99 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Gins1Q9CZ15 196 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Hint2Q9D0S9 163 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Olfr971Q9EQ96 307 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 IL36RNQ9QYY1 156 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 CtszQ9WUU7 306 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Myh9Q8VDD5 1960 aaKnown RBP13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Kcnmb3E9Q7U0 239 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Gm4141K9J7H2 306 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Gm8024L7N2E0 100 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Cd82P40237 266 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Fam187bQ0VAY3 358 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Vwa5b2Q3UR50 1248 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Fa2hQ5MPP0 372 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 NnatQ61979 81 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Pck2Q8BH04 640 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Mic13Q8R404 119 aaKnown RBP13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Olfr849Q8VFF6 312 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Ubqln4Q99NB8 596 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Trhr2Q9ERT2 382 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Zbp1Q9QY24 411 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Hnf4gQ9WUU6 408 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Mecp2Q9Z2D6 484 aaKnown RBP13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 PvrigA0A1B0GS01 234 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Amy2a1E9PV85 245 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 DhodhO35435 395 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 P01670 111 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 P01671 111 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 P01672 111 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 ElocP83940 112 aaKnown RBP13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Cited1P97769 203 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Cacna1cQ01815 2139 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 PianpQ6P1B3 278 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Il20raQ6PHB0 546 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Cnot4Q8BT14 575 aaKnown RBP13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 4930451G09RikQ8C5G4 195 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Slc38a2Q8CFE6 504 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Vmn1r211Q8R266 298 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Slco3a1Q8R3L5 710 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Olfr668Q8VGW3 318 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Kcnip1Q9JJ57 227 aa13.54□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Olfr1109A2AT96 312 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Gm11758A2BEI6 360 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Gm11757A2BEI8 360 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Gm8225D3Z536 292 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Gm11239E9Q5Z9 360 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Gm11237F2Z3W5 360 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Gm11238F2Z478 360 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 MplQ08351 625 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Tmem38aQ3TMP8 298 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Gm428Q3UTE2 360 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Ugt8Q64676 541 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Znf750Q8BH05 703 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Dync2li1Q8K0T2 351 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Q9DAE8 263 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Insm2Q9JMC2 493 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 SrpxQ9R0M3 464 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Syt7Q9R0N7 403 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Skp2Q9Z0Z3 424 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Chst13D3Z6E3 336 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Olfr914E9PW59 316 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Chek1O35280 476 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Slc18a3O35304 530 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Sdc1P18828 311 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 IhhP97812 411 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 LipnQ3U4B4 400 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Slc22a20Q80UJ1 556 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Kiaa0895lQ810A5 467 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 PdhxQ8BKZ9 501 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Nfatc4Q8K120 901 aa13.53□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Olfr860Q8VFF7 317 aa13.53□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms