RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Taar8cQ5QD05 344 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Frg2f1Q6P3A2 227 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Adgrd1Q80T32 903 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gm3550W4VSN7 160 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1218L7MU54 311 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 PhyhO35386 338 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Folr1P35846 255 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 GnptgQ6S5C2 307 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Lyrm2Q8R033 88 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Kiaa0513Q8R0A7 407 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Vmn1r35Q8R2E2 296 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Letmd1Q924L1 360 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1326-ps1A0A140T8J7 311 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Cxcl5P50228 132 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Neurog1P70660 244 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 BaxQ07813 192 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr11Q60890 313 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 HhipQ7TN16 700 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Comtd1Q8BIG7 262 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 RbksQ8R1Q9 323 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Lrrc18Q9CQ07 262 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Q9CQT9 129 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1247A2AT78 314 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Vmn1r174E9PYW5 313 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 AunipE9Q6Z5 340 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Vmn1r173E9Q8V7 313 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Agr2O88312 175 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Mmp2P33434 662 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gpr39Q5U431 456 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Foxj1Q61660 421 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Cntn4Q69Z26 1026 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gal3st2Q6XQH0 394 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr780Q8VEU0 312 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Rasal1Q9Z268 799 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr69E9Q7C5 316 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr173E9QAT7 321 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 EmdO08579 259 aaKnown RBP11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Sox18P43680 377 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Emp1P47801 160 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Ces2fQ08ED5 561 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 MpiQ924M7 423 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Exosc8Q9D753 276 aaKnown RBP11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Six6Q9QZ28 246 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Zfp961E9Q4R5 444 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gm9602J3QPD5 205 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Garem1Q3UFT3 876 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Runx3Q64131 409 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Exosc3Q7TQK4 274 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr917Q7TRC3 309 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 C2cd4bQ80XU5 340 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Sec22aQ8BH47 307 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Clec9aQ8BRU4 238 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Fam234bQ8BYI8 624 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Rdh16f2Q8K3M1 318 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1384Q8VFA8 318 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Fam3cQ91VU0 227 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Eif3fQ9DCH4 361 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Pde7bQ9QXQ1 446 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gk2Q9WU65 554 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gm3952A0A0A6YXJ1 191 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Slc23a4A0A0J9YUX7 615 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Ceacam3E9Q6J4 706 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Zfp760E9QAF5 666 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 P01652 108 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Rpl18P35980 188 aaKnown RBP11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Tnfrsf4P47741 272 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Tnfsfm13Q8BXS2 410 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Hacd1Q9QY80 281 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Ankrd31A0A140LI88 1765 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Hoxd12P23812 268 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Fa2hQ5MPP0 372 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Sqstm1Q64337 442 aaKnown RBP11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Q80W69 301 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Prss27Q8BJR6 328 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1347Q8VF33 319 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Lipo5F6QKH6 233 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Cnih1O35372 144 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Rab22aP35285 194 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1222Q7TR02 311 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Lrrc75aQ7TSF4 339 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 TigarQ8BZA9 269 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Stpg2Q8C8J0 561 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Crlf2Q8CII9 359 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr572Q8VGZ3 318 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Wdr77Q99J09 342 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Lancl2Q9JJK2 450 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 LipgQ9WVG5 500 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Cldn8Q9Z260 225 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gm13276A0A087WR18 182 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Lrrc3cA0A1B0GRI5 255 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Slc38a6G3UVW3 457 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gm21818J3KMS6 170 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Fli1P26323 452 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Htr1fQ02284 366 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 2700097O09RikQ6PGK3 301 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 D11Wsu47eQ6PIX9 558 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Rab27bQ99P58 218 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 NaaaQ9D7V9 362 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 Ambra1A2AH22 1300 aa11.06□□□□□ -0.64
Trim56-201ENSMUST00000054384 SpibO35906 267 aa11.06□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms