RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Olfr1168Q7TR25 312 aa12.22□□□□□ -0.45
Nup88-201ENSMUST00000035283 Plppr1Q8BFZ2 325 aa12.22□□□□□ -0.45
Nup88-201ENSMUST00000035283 Olfr1217Q8VGG1 304 aa12.22□□□□□ -0.45
Nup88-201ENSMUST00000035283 Wdr13Q91V09 485 aa12.22□□□□□ -0.45
Nup88-201ENSMUST00000035283 Fam69bQ99ML4 431 aa12.22□□□□□ -0.45
Nup88-201ENSMUST00000035283 Ankrd22Q9D3J5 191 aa12.22□□□□□ -0.45
Nup88-201ENSMUST00000035283 Stard10Q9JMD3 291 aa12.22□□□□□ -0.45
Nup88-201ENSMUST00000035283 Plxnd1Q3UH93 1925 aa12.22□□□□□ -0.45
Nup88-201ENSMUST00000035283 Frem2Q6NVD0 3160 aa12.22□□□□□ -0.45
Nup88-201ENSMUST00000035283 Dock6Q8VDR9 2080 aa12.22□□□□□ -0.45
Nup88-201ENSMUST00000035283 Gm5519D3Z175 170 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Esp34G3UXG0 151 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Fbxw15L7N1X6 466 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 DgkaO88673 730 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Tyrp1P07147 537 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Gpr52P0C5J4 361 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Klk1b9P15949 261 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Pou3f3P31361 497 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Bmp8aP34821 399 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Atp5j2P56135 88 aaKnown RBP12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Ufd1P70362 307 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Fgf13P70377 245 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 DmwdQ08274 665 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Slc35a1Q61420 336 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Pptc7Q6NVE9 310 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Znf775Q8BI73 538 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 SdhaQ8K2B3 664 aaKnown RBP12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 P2rx2Q8K3P1 485 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Pttg1ipQ8R143 174 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Vmn1r23Q8R2D0 302 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Olfr828Q8VFM8 312 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Olfr1163Q8VFR4 316 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Sntb1Q99L88 537 aaKnown RBP12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Mgst3Q9CPU4 153 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Rnf128Q9D304 428 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Cir1Q9DA19 450 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Olfr944Q9EQ91 311 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Elp4Q9ER73 422 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 FancmQ8BGE5 2021 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Olfr1156A2AVC3 323 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Rd3lB2RV38 197 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Vmn1r68E9Q0V3 319 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 DhodhO35435 395 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Ccr6O54689 367 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Dll3O88516 592 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 CfpP11680 464 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 UoxP25688 303 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 CdaP56389 146 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Actr1aP61164 376 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Ppp1caP62137 330 aaKnown RBP12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Olfr90Q0VEL5 310 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Uap1l1Q3TW96 507 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 C1rlQ3UZ09 482 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Uhrf2Q7TMI3 803 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 B630019K06RikQ7TNS5 333 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Lhfpl6Q8BM86 200 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Sdhaf3Q8BQU3 125 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Q8C5S3 137 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Hist1h2akQ8CGP7 130 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 FRRS1Q8K385 592 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Actr1bQ8R5C5 376 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Olfr1176Q8VG40 315 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Olfr582Q8VGV9 319 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Carhsp1Q9CR86 148 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Phospho2Q9D9M5 241 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Kcnmb4Q9JIN6 210 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Tas2r105Q9JKT4 300 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 FaimQ9WUD8 179 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Abhd16aQ9Z1Q2 558 aa12.21□□□□□ -0.45
Nup88-201ENSMUST00000035283 Tcrg-V7A0A0A6YYE8 116 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Prr32A2AFE9 284 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 5430403G16RikD3Z5L4 667 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 4930595D18RikD3Z642 64 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Gm45711E0CXA2 391 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr68E9PYY2 315 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Vmn1r67G5E8C1 305 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Vmn1r94K7N6X3 305 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Ogg1O08760 345 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 HexaP29416 528 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Foxa1P35582 468 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Foxa3P35584 353 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Plpp5Q3UMZ3 260 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Dhrs9Q58NB6 319 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 ArhgdigQ62160 225 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Fam122bQ6NZE7 255 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 H2-M2Q6W9L1 343 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Prkd2Q8BZ03 875 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Inpp5kQ8C5L6 468 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 CdnfQ8CC36 187 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 4933402N03RikQ8CDT9 329 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Il17rcQ8K4C2 698 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Cacnb4Q8R0S4 519 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Tmed4Q8R1V4 227 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 0610009B22RikQ8R3W2 140 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr870Q8VGG4 311 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 TardbpQ921F2 414 aaKnown RBP12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Q9DAR0 182 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Sema4fQ9Z123 777 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Gm21858A0A087WQ24 222 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Mllt6B1AR10 1109 aa12.2□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 86 ms