RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 LOC100509620A0A075B734 347 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 TMEM129A0AVI4 362 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 IGHV4-39P01824 125 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 GSTM3P21266 225 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 GUCA1AP43080 201 aaPredicted RBP18.78■□□□□ 0.6
SCN1B-206ENST00000638536 ZNF774Q6NX45 483 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 YTHDF3Q7Z739 585 aaKnown RBP18.78■□□□□ 0.6
SCN1B-206ENST00000638536 GLB1L2Q8IW92 636 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 LNX2Q8N448 690 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 IQCF1Q8N6M8 205 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 C11orf40Q8WZ69 217 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 DUS3LQ96G46 650 aaKnown RBP18.78■□□□□ 0.6
SCN1B-206ENST00000638536 TMCC2O75069 709 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 FAM157BP0CG42 384 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 GAAP10253 952 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 HSF2Q03933 536 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.78■□□□□ 0.6
SCN1B-206ENST00000638536 SNX18Q96RF0 628 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 ZNF442Q9H7R0 627 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 FBXL3Q9UKT7 428 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 AP4S1Q9Y587 144 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 TLN2Q9Y4G6 2542 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 ZFHX3Q15911 3703 aa18.78■□□□□ 0.6
SCN1B-206ENST00000638536 IQCMA0A1B0GVH7 501 aa18.77■□□□□ 0.6
SCN1B-206ENST00000638536 RENP00797 406 aa18.77■□□□□ 0.6
SCN1B-206ENST00000638536 STOMP27105 288 aa18.77■□□□□ 0.6
SCN1B-206ENST00000638536 CRABP1P29762 137 aa18.77■□□□□ 0.6
SCN1B-206ENST00000638536 CENPAP49450 140 aa18.77■□□□□ 0.6
SCN1B-206ENST00000638536 ERVS71-1P61550 626 aa18.77■□□□□ 0.6
SCN1B-206ENST00000638536 PLP2Q04941 152 aa18.77■□□□□ 0.6
SCN1B-206ENST00000638536 COX10Q12887 443 aa18.77■□□□□ 0.6
SCN1B-206ENST00000638536 SHEQ5VZ18 495 aa18.77■□□□□ 0.6
SCN1B-206ENST00000638536 AMIGO2Q86SJ2 522 aa18.77■□□□□ 0.6
SCN1B-206ENST00000638536 ZBTB46Q86UZ6 589 aa18.77■□□□□ 0.6
SCN1B-206ENST00000638536 SLC37A3Q8NCC5 494 aa18.77■□□□□ 0.6
SCN1B-206ENST00000638536 LRTOMTQ8WZ04 291 aa18.77■□□□□ 0.6
SCN1B-206ENST00000638536 POM121L2Q96KW2 1035 aa18.77■□□□□ 0.6
SCN1B-206ENST00000638536 FZR1Q9UM11 496 aa18.77■□□□□ 0.6
SCN1B-206ENST00000638536 TIMM10BQ9Y5J6 103 aa18.77■□□□□ 0.6
SCN1B-206ENST00000638536 CSPG4Q6UVK1 2322 aa18.76■□□□□ 0.59
SCN1B-206ENST00000638536 DEAF1O75398 565 aaPredicted RBP18.76■□□□□ 0.59
SCN1B-206ENST00000638536 CIB2O75838 187 aa18.76■□□□□ 0.59
SCN1B-206ENST00000638536 TFP02787 698 aa18.76■□□□□ 0.59
SCN1B-206ENST00000638536 CCNOP22674 350 aa18.76■□□□□ 0.59
SCN1B-206ENST00000638536 SHQ1Q6PI26 577 aaKnown RBP18.76■□□□□ 0.59
SCN1B-206ENST00000638536 LRP11Q86VZ4 500 aa18.76■□□□□ 0.59
SCN1B-206ENST00000638536 OR2T33Q8NG76 320 aa18.76■□□□□ 0.59
SCN1B-206ENST00000638536 Q96MF0 132 aa18.76■□□□□ 0.59
SCN1B-206ENST00000638536 TMUB1Q9BVT8 246 aa18.76■□□□□ 0.59
SCN1B-206ENST00000638536 ASH2LQ9UBL3 628 aa18.76■□□□□ 0.59
SCN1B-206ENST00000638536 C12orf71A8MTZ7 269 aa18.75■□□□□ 0.59
SCN1B-206ENST00000638536 PYCR1P32322 319 aa18.75■□□□□ 0.59
SCN1B-206ENST00000638536 GLRXP35754 106 aa18.75■□□□□ 0.59
SCN1B-206ENST00000638536 WNT5AP41221 380 aa18.75■□□□□ 0.59
SCN1B-206ENST00000638536 GALK2Q01415 458 aa18.75■□□□□ 0.59
SCN1B-206ENST00000638536 CRMP1Q14194 572 aa18.75■□□□□ 0.59
SCN1B-206ENST00000638536 KPNB1Q14974 876 aaKnown RBP18.75■□□□□ 0.59
SCN1B-206ENST00000638536 ATP6AP1Q15904 470 aa18.75■□□□□ 0.59
SCN1B-206ENST00000638536 ACSM5Q6NUN0 579 aa18.75■□□□□ 0.59
SCN1B-206ENST00000638536 LYPD4Q6UWN0 246 aa18.75■□□□□ 0.59
SCN1B-206ENST00000638536 ZNF101Q8IZC7 436 aa18.75■□□□□ 0.59
SCN1B-206ENST00000638536 SVOPLQ8N434 492 aa18.75■□□□□ 0.59
SCN1B-206ENST00000638536 OR51L1Q8NGJ5 315 aa18.75■□□□□ 0.59
SCN1B-206ENST00000638536 OR9Q1Q8NGQ5 310 aa18.75■□□□□ 0.59
SCN1B-206ENST00000638536 PYDC1Q8WXC3 89 aa18.75■□□□□ 0.59
SCN1B-206ENST00000638536 TRMT61AQ96FX7 289 aaKnown RBP18.75■□□□□ 0.59
SCN1B-206ENST00000638536 MRPL37Q9BZE1 423 aaKnown RBP18.75■□□□□ 0.59
SCN1B-206ENST00000638536 RACGAP1Q9H0H5 632 aa18.75■□□□□ 0.59
SCN1B-206ENST00000638536 PLK3Q9H4B4 646 aa18.75■□□□□ 0.59
SCN1B-206ENST00000638536 CDH20Q9HBT6 801 aa18.75■□□□□ 0.59
SCN1B-206ENST00000638536 C5orf49A4QMS7 147 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 TRIM64A6NGJ6 449 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 TRIM64BA6NI03 449 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 H3BN98 237 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 LY6HO94772 140 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 SNAP29O95721 258 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 CLUP10909 449 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 POU1F1P28069 291 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 APLNRP35414 380 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 DAPP51397 102 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 EFNB3Q15768 340 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 KCNMB1Q16558 191 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 TBC1D28Q2M2D7 210 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 CORO6Q6QEF8 472 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 PRSS57Q6UWY2 283 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 SYT9Q86SS6 491 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 ZCCHC24Q8N2G6 241 aaKnown RBP18.74■□□□□ 0.59
SCN1B-206ENST00000638536 CIARTQ8N365 385 aaPredicted RBP18.74■□□□□ 0.59
SCN1B-206ENST00000638536 SLC26A10Q8NG04 563 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 DOK1Q99704 481 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 RBM4Q9BWF3 364 aaKnown RBP18.74■□□□□ 0.59
SCN1B-206ENST00000638536 MRPL22Q9NWU5 206 aaKnown RBP18.74■□□□□ 0.59
SCN1B-206ENST00000638536 MYEF2Q9P2K5 600 aaKnown RBP18.74■□□□□ 0.59
SCN1B-206ENST00000638536 FKBP7Q9Y680 259 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 LHFPL6Q9Y693 200 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 B9A039 149 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 PTHP01270 115 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 GYPBP06028 91 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 ACTR3P61158 418 aa18.74■□□□□ 0.59
SCN1B-206ENST00000638536 PCBD1P61457 104 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms