RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ARHGAP23Q9P227 1491 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 DIP2AQ14689 1571 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 FAM183AA6NL82 134 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 MKRN2OSH3BPM6 223 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 PRAMEF11O60813 436 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 PIAS2O75928 621 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 MPC1LP0DKB6 136 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 RRASP10301 218 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 PPP1CBP62140 327 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 SIRPAP78324 504 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 LSM11P83369 360 aaKnown RBP eCLIP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 MGAT3Q09327 533 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 NHSL2Q5HYW2 709 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 NCCRP1Q6ZVX7 275 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 TMEM116Q8NCL8 245 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 PHLDA1Q8WV24 401 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 WNT6Q9Y6F9 365 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 TAAR5O14804 337 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 CA3P07451 260 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 T-ENOLP0DO92 83 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 CD44P16070 742 aaKnown RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 CKMT2P17540 419 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 PGGT1BP53609 377 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 Q6ZTK2 550 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 AAED1Q7RTV5 226 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 ZFAND4Q86XD8 727 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 NKX2-4Q9H2Z4 354 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 TAF9BQ9HBM6 251 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 PREBQ9HCU5 417 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 ANKMY1Q9P2S6 941 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 HSPB8Q9UJY1 196 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 TARBP1Q13395 1621 aaKnown RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 CACNA1HO95180 2353 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 LOC285095A0A1B0GVY8 99 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 A0A1W2PQU0 124 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 IGLON5A6NGN9 336 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 PEX10O60683 326 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 HSBP1O75506 76 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 RPL17P18621 184 aaKnown RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 SOX18P35713 384 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 HMGCLP35914 325 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 UFM1P61960 85 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 SIM1P81133 766 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 JOSD1Q15040 202 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 TAZQ16635 292 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 PLA1AQ53H76 456 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 TREML2Q5T2D2 321 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 YOD1Q5VVQ6 348 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 TMEM207Q6UWW9 146 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 B3GNT9Q6UX72 402 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 MDGA2Q7Z553 956 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 SPRED1Q7Z699 444 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 TBC1D26Q86UD7 250 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 DND1Q8IYX4 353 aaKnown RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 PARP16Q8N5Y8 322 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 TSEN2Q8NCE0 465 aaKnown RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 FAM156AQ8NDB6 213 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 ZFPM2Q8WW38 1151 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 IL22RA2Q969J5 263 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 SLC35A4Q96G79 324 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 OR10C1Q96KK4 312 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 HSD3B7Q9H2F3 369 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 DOK5Q9P104 306 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 USP22Q9UPT9 525 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 ENPP4Q9Y6X5 453 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 LEFTY2O00292 366 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 UPK1BO75841 260 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 FAM155BO75949 473 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 OR2F2O95006 317 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 F11P03951 625 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 CFHP08603 1231 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 PDZD11Q5EBL8 140 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 SPANXN4Q5MJ08 99 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 GLYATL3Q5SZD4 288 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 Q6ZSR6 202 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 NDUFAF7Q7L592 441 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 SLC36A1Q7Z2H8 476 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 ERASQ7Z444 233 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 OR8I2Q8N0Y5 310 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 TMEM40Q8WWA1 233 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 TSACCQ96A04 125 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 DDX31Q9H8H2 851 aaKnown RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 ERCC6L2Q5T890 1561 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 HSD17B6O14756 317 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 NEURL1O76050 574 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 VNN1O95497 513 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 CSF3P09919 207 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 HIST1H1EP10412 219 aaKnown RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 KIR2DS2P43631 304 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 GPM6AP51674 278 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 VEZF1Q14119 521 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 LAPTM4AQ15012 233 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 IAH1Q2TAA2 248 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ACSM6Q6P461 480 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ETV3LQ6ZN32 361 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 EID2Q8N6I1 236 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 NECAP1Q8NC96 275 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 OR2G3Q8NGZ4 309 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 FYTTD1Q96QD9 318 aaKnown RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 RAB1BQ9H0U4 201 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms