RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 ZNF347Q96SE7 839 aa16.22■□□□□ 0.19
CDX1-202ENST00000616154 ALG12Q9BV10 488 aa16.22■□□□□ 0.19
CDX1-202ENST00000616154 YY1AP1Q9H869 796 aa16.22■□□□□ 0.19
CDX1-202ENST00000616154 RHCGQ9UBD6 479 aa16.22■□□□□ 0.19
CDX1-202ENST00000616154 FZR1Q9UM11 496 aa16.22■□□□□ 0.19
CDX1-202ENST00000616154 A0A1W2PPW3 197 aa16.21■□□□□ 0.19
CDX1-202ENST00000616154 NCR1O76036 304 aa16.21■□□□□ 0.19
CDX1-202ENST00000616154 TFP02787 698 aa16.21■□□□□ 0.19
CDX1-202ENST00000616154 NR2C1P13056 603 aa16.21■□□□□ 0.19
CDX1-202ENST00000616154 TMEM33P57088 247 aa16.21■□□□□ 0.19
CDX1-202ENST00000616154 CLRN1P58418 232 aa16.21■□□□□ 0.19
CDX1-202ENST00000616154 MRPS34P82930 218 aaKnown RBP16.21■□□□□ 0.19
CDX1-202ENST00000616154 RIPK1Q13546 671 aa16.21■□□□□ 0.19
CDX1-202ENST00000616154 CYP4Z1Q86W10 505 aa16.21■□□□□ 0.19
CDX1-202ENST00000616154 MEX3DQ86XN8 651 aaKnown RBP16.21■□□□□ 0.19
CDX1-202ENST00000616154 ZNF519Q8TB69 540 aa16.21■□□□□ 0.19
CDX1-202ENST00000616154 SLC7A13Q8TCU3 470 aa16.21■□□□□ 0.19
CDX1-202ENST00000616154 HDAC2Q92769 488 aaKnown RBP16.21■□□□□ 0.19
CDX1-202ENST00000616154 ZNF275Q9NSD4 429 aaPredicted RBP16.21■□□□□ 0.19
CDX1-202ENST00000616154 DUSP13Q9UII6 198 aa16.21■□□□□ 0.19
CDX1-202ENST00000616154 METRNQ9UJH8 293 aa16.21■□□□□ 0.19
CDX1-202ENST00000616154 UGT2A1Q9Y4X1 527 aa16.21■□□□□ 0.19
CDX1-202ENST00000616154 SLC22A23A1A5C7 686 aa16.2■□□□□ 0.18
CDX1-202ENST00000616154 FAM157AC9JC47 383 aa16.2■□□□□ 0.18
CDX1-202ENST00000616154 KRT36O76013 467 aa16.2■□□□□ 0.18
CDX1-202ENST00000616154 FARS2O95363 451 aaKnown RBP16.2■□□□□ 0.18
CDX1-202ENST00000616154 NAT2P11245 290 aa16.2■□□□□ 0.18
CDX1-202ENST00000616154 FCGR1AP12314 374 aa16.2■□□□□ 0.18
CDX1-202ENST00000616154 RPL27P61353 136 aaKnown RBP16.2■□□□□ 0.18
CDX1-202ENST00000616154 RGS7BPQ6MZT1 257 aaPredicted RBP16.2■□□□□ 0.18
CDX1-202ENST00000616154 ZNF730Q6ZMV8 503 aa16.2■□□□□ 0.18
CDX1-202ENST00000616154 SLC30A7Q8NEW0 376 aa16.2■□□□□ 0.18
CDX1-202ENST00000616154 FNDC8Q8TC99 324 aa16.2■□□□□ 0.18
CDX1-202ENST00000616154 STMN2Q93045 179 aa16.2■□□□□ 0.18
CDX1-202ENST00000616154 TMEM186Q96B77 213 aa16.2■□□□□ 0.18
CDX1-202ENST00000616154 FUZQ9BT04 418 aa16.2■□□□□ 0.18
CDX1-202ENST00000616154 ZNF416Q9BWM5 594 aa16.2■□□□□ 0.18
CDX1-202ENST00000616154 C1orf198Q9H425 327 aa16.2■□□□□ 0.18
CDX1-202ENST00000616154 NARFLQ9H6Q4 476 aa16.2■□□□□ 0.18
CDX1-202ENST00000616154 TMEM5Q9Y2B1 443 aa16.2■□□□□ 0.18
CDX1-202ENST00000616154 EFCAB9A8MZ26 197 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 H0YHG0 523 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 CDC42EP2O14613 210 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 RP2O75695 350 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 MSMBP08118 114 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 MMP7P09237 267 aaPredicted RBP16.19■□□□□ 0.18
CDX1-202ENST00000616154 LIMS1P48059 325 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 ZNF84P51523 738 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 HMGA2P52926 109 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 ATP6AP1Q15904 470 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 TMEM53Q6P2H8 277 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 FOXL2NBQ6ZUU3 175 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 OAFQ86UD1 273 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 PAQR4Q8N4S7 273 aaPredicted RBP16.19■□□□□ 0.18
CDX1-202ENST00000616154 SYT14Q8NB59 555 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 OR4K5Q8NGD3 323 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 NABP1Q96AH0 204 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 SH3GL3Q99963 347 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 HIF1ANQ9NWT6 349 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 DNAJB9Q9UBS3 223 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 TENM1Q9UKZ4 2725 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 IGLV3-9A0A075B6K5 115 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 TRAV27A0A087WT01 109 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 A0A0A6YYJ9 748 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 IGKV1D-43A0A0B4J1Z2 117 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 WNT9BO14905 357 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 PPIHO43447 177 aaKnown RBP16.19■□□□□ 0.18
CDX1-202ENST00000616154 TIPRLO75663 272 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 SNAP29O95721 258 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 H1F0P07305 194 aaKnown RBP16.19■□□□□ 0.18
CDX1-202ENST00000616154 GAAP10253 952 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 ZNF250P15622 560 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 ZNF26P17031 533 aaPredicted RBP16.19■□□□□ 0.18
CDX1-202ENST00000616154 GK3PQ14409 553 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 NKPD1Q17RQ9 610 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 SLC36A2Q495M3 483 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 OR2T5Q6IEZ7 315 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 SLC25A47Q6Q0C1 308 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 TBPL2Q6SJ96 375 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 OR13C2Q8NGS9 318 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 OR2T29Q8NH02 315 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 OR51F2Q8NH61 342 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 TSPAN32Q96QS1 320 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 METTL17Q9H7H0 456 aaPredicted RBP16.19■□□□□ 0.18
CDX1-202ENST00000616154 DCLRE1BQ9H816 532 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 SIAEQ9HAT2 523 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 NTN4Q9HB63 628 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 CDH20Q9HBT6 801 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 TREM2Q9NZC2 230 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 TAAR3PQ9P1P4 343 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 GPR160Q9UJ42 338 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 GRIP1Q9Y3R0 1128 aa16.19■□□□□ 0.18
CDX1-202ENST00000616154 A6NIZ1 184 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 C17orf100A8MU93 164 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 DEAF1O75398 565 aaPredicted RBP16.18■□□□□ 0.18
CDX1-202ENST00000616154 DIRAS1O95057 198 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 SLC2A10O95528 541 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 FAM157BP0CG42 384 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 FASP25445 335 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 MAGEB1P43366 347 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms