RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ZFPL1O95159 310 aa19.1■□□□□ 0.65
USP6NL-204ENST00000606752 IGHG3P01860 377 aa19.1■□□□□ 0.65
USP6NL-204ENST00000606752 BMXP51813 675 aa19.1■□□□□ 0.65
USP6NL-204ENST00000606752 RIDAP52758 137 aaKnown RBP19.1■□□□□ 0.65
USP6NL-204ENST00000606752 RPS11P62280 158 aaKnown RBP eCLIP19.1■□□□□ 0.65
USP6NL-204ENST00000606752 CORO6Q6QEF8 472 aa19.1■□□□□ 0.65
USP6NL-204ENST00000606752 PAMR1Q6UXH9 720 aa19.1■□□□□ 0.65
USP6NL-204ENST00000606752 SPATC1Q76KD6 591 aa19.1■□□□□ 0.65
USP6NL-204ENST00000606752 CHMP1BQ7LBR1 199 aa19.1■□□□□ 0.65
USP6NL-204ENST00000606752 ULBP2Q9BZM5 246 aa19.1■□□□□ 0.65
USP6NL-204ENST00000606752 EMC7Q9NPA0 242 aa19.1■□□□□ 0.65
USP6NL-204ENST00000606752 SPRR3Q9UBC9 169 aa19.1■□□□□ 0.65
USP6NL-204ENST00000606752 DNAJC13O75165 2243 aa19.1■□□□□ 0.65
USP6NL-204ENST00000606752 CASKO14936 926 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 CLEC2LP0C7M8 214 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 OPRL1P41146 370 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 YIF1BQ5BJH7 314 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 FOXL2NBQ6ZUU3 175 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 TEX19Q8NA77 164 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 OR13C5Q8NGS8 318 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 OR5AK2Q8NH90 309 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 RNF133Q8WVZ7 376 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 TMEM45BQ96B21 275 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 WDYHV1Q96HA8 205 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 DCBLD2Q96PD2 775 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 C6orf62Q9GZU0 229 aaPredicted RBP19.09■□□□□ 0.65
USP6NL-204ENST00000606752 C1orf198Q9H425 327 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 LRP12Q9Y561 859 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 A0A075B6Q4 140 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 GATBO75879 557 aaKnown RBP19.09■□□□□ 0.65
USP6NL-204ENST00000606752 WNT11O96014 354 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 CALRP27797 417 aaKnown RBP19.09■□□□□ 0.65
USP6NL-204ENST00000606752 MTNR1BP49286 362 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 DYNC1I2Q13409 638 aaKnown RBP19.09■□□□□ 0.65
USP6NL-204ENST00000606752 ZNF169Q14929 603 aaPredicted RBP19.09■□□□□ 0.65
USP6NL-204ENST00000606752 ZMAT1Q5H9K5 638 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 OR7E24Q6IFN5 339 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 OR2AJ1Q8NGZ0 328 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 FNDC9Q8TBE3 224 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 RBM24Q9BX46 236 aaKnown RBP19.09■□□□□ 0.65
USP6NL-204ENST00000606752 PRRG4Q9BZD6 226 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 PPIL3Q9H2H8 161 aaKnown RBP19.09■□□□□ 0.65
USP6NL-204ENST00000606752 POLR1DQ9Y2S0 133 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 LHFPL6Q9Y693 200 aa19.09■□□□□ 0.65
USP6NL-204ENST00000606752 SHISA3A0PJX4 238 aa19.08■□□□□ 0.64
USP6NL-204ENST00000606752 OR4C45A6NMZ5 311 aa19.08■□□□□ 0.64
USP6NL-204ENST00000606752 ZNF84P51523 738 aa19.08■□□□□ 0.64
USP6NL-204ENST00000606752 CCR9P51686 369 aa19.08■□□□□ 0.64
USP6NL-204ENST00000606752 LSM6P62312 80 aaKnown RBP19.08■□□□□ 0.64
USP6NL-204ENST00000606752 C3AR1Q16581 482 aa19.08■□□□□ 0.64
USP6NL-204ENST00000606752 UNQ9370/PRO34162Q6UXP9 181 aa19.08■□□□□ 0.64
USP6NL-204ENST00000606752 PHYHIPQ92561 330 aa19.08■□□□□ 0.64
USP6NL-204ENST00000606752 EMC3Q9P0I2 261 aa19.08■□□□□ 0.64
USP6NL-204ENST00000606752 DKK4Q9UBT3 224 aa19.08■□□□□ 0.64
USP6NL-204ENST00000606752 GDF2Q9UK05 429 aaPredicted RBP19.08■□□□□ 0.64
USP6NL-204ENST00000606752 APC2O95996 2303 aa19.08■□□□□ 0.64
USP6NL-204ENST00000606752 A0A1B0GTH9 108 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 TMEM212A6NML5 194 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 EIF2S3P41091 472 aaKnown RBP19.07■□□□□ 0.64
USP6NL-204ENST00000606752 HNRNPA0Q13151 305 aaKnown RBP19.07■□□□□ 0.64
USP6NL-204ENST00000606752 SGCAQ16586 387 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 FAM27D1Q5T7N8 215 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 S100ZQ8WXG8 99 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 SLAMF6Q96DU3 332 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 C4orf45Q96LM5 186 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 NELFAQ9H3P2 528 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 RNF122Q9H9V4 155 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 B3GAT2Q9NPZ5 323 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 CENPMQ9NSP4 180 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 CRNNQ9UBG3 495 aaPredicted RBP19.07■□□□□ 0.64
USP6NL-204ENST00000606752 NOSIPQ9Y314 301 aaKnown RBP19.07■□□□□ 0.64
USP6NL-204ENST00000606752 ZFHX4Q86UP3 3567 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 CFAP47Q6ZTR5 3102 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 H2BFMP0C1H6 154 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 MSR1P21757 451 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 ZNF829Q3KNS6 432 aaPredicted RBP19.07■□□□□ 0.64
USP6NL-204ENST00000606752 RIPPLY2Q5TAB7 128 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 ZNF544Q6NX49 715 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 RHOUQ7L0Q8 258 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.07■□□□□ 0.64
USP6NL-204ENST00000606752 GPR137CQ8N3F9 429 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 PRSS35Q8N3Z0 413 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 KCNS3Q9BQ31 491 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 COMMD4Q9H0A8 199 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 PARPBPQ9NWS1 579 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 PEX16Q9Y5Y5 336 aa19.07■□□□□ 0.64
USP6NL-204ENST00000606752 A0A1B0GVC2 190 aa19.06■□□□□ 0.64
USP6NL-204ENST00000606752 ZNF724A8MTY0 619 aa19.06■□□□□ 0.64
USP6NL-204ENST00000606752 MRPL33O75394 65 aaKnown RBP19.06■□□□□ 0.64
USP6NL-204ENST00000606752 PNPP00491 289 aa19.06■□□□□ 0.64
USP6NL-204ENST00000606752 MYL9P24844 172 aa19.06■□□□□ 0.64
USP6NL-204ENST00000606752 RNPS1Q15287 305 aaKnown RBP19.06■□□□□ 0.64
USP6NL-204ENST00000606752 WDR38Q5JTN6 314 aa19.06■□□□□ 0.64
USP6NL-204ENST00000606752 Q6ZS92 163 aa19.06■□□□□ 0.64
USP6NL-204ENST00000606752 TPRA1Q86W33 373 aa19.06■□□□□ 0.64
USP6NL-204ENST00000606752 RGP1Q92546 391 aaPredicted RBP19.06■□□□□ 0.64
USP6NL-204ENST00000606752 HTRA1Q92743 480 aa19.06■□□□□ 0.64
USP6NL-204ENST00000606752 BCO1Q9HAY6 547 aa19.06■□□□□ 0.64
USP6NL-204ENST00000606752 PLGRKTQ9HBL7 147 aa19.06■□□□□ 0.64
USP6NL-204ENST00000606752 ASH2LQ9UBL3 628 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms