RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 OR51A7Q8NH64 312 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 NANPQ8TBE9 248 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 FNDC8Q8TC99 324 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 GEMIN6Q8WXD5 167 aaKnown RBP11.15□□□□□ -0.62
RPS28-204ENST00000602140 PRRC1Q96M27 445 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 JMJD8Q96S16 334 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 SLC6A7Q99884 636 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 RBM4Q9BWF3 364 aaKnown RBP11.15□□□□□ -0.62
RPS28-204ENST00000602140 SUCNR1Q9BXA5 334 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 C7orf69Q9H7B7 122 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 ELOVL3Q9HB03 270 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 MSL2Q9HCI7 577 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 CYSLTR2Q9NS75 346 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 UBAP1Q9NZ09 502 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 KLHL21Q9UJP4 597 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 TRAV27A0A087WT01 109 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 LOC100653049A0A140TA62 436 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 HTR3EA5X5Y0 456 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 A6NIZ1 184 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 BBIP1A8MTZ0 92 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 FAM220BPB1ANY3 271 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 H3BSA7 217 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 KRT34O76011 436 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 ADH4P08319 380 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 GATA3P23771 443 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 IFNA8P32881 189 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 YAP1P46937 504 aaKnown RBP11.14□□□□□ -0.63
RPS28-204ENST00000602140 ARHGDIAP52565 204 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 RAP1BP61224 184 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 RAP1AP62834 184 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 SELENOWP63302 87 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 LCN2P80188 198 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 ENDOGQ14249 297 aaKnown RBP11.14□□□□□ -0.63
RPS28-204ENST00000602140 MAPRE2Q15555 327 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 FAM205BPQ63HN1 556 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 FOXL2NBQ6ZUU3 175 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 OAFQ86UD1 273 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 NRMQ8IXM6 262 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 OR2T12Q8NG77 320 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 C4orf45Q96LM5 186 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 MRGBPQ9NV56 204 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 RHCGQ9UBD6 479 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 CGGBP1Q9UFW8 167 aaPredicted RBP11.14□□□□□ -0.63
RPS28-204ENST00000602140 OPN4Q9UHM6 478 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 ZDHHC8Q9ULC8 765 aa11.14□□□□□ -0.63
RPS28-204ENST00000602140 C12orf71A8MTZ7 269 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 EFCAB9A8MZ26 197 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 H7C1C5 153 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 J3KTA2 159 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 TIMM8AO60220 97 aaPredicted RBP11.13□□□□□ -0.63
RPS28-204ENST00000602140 ICMTO60725 284 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 ABHD16AO95870 558 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 SCG5P05408 212 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 CD55P08174 381 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 TROVE2P10155 538 aaKnown RBP eCLIP11.13□□□□□ -0.63
RPS28-204ENST00000602140 MSR1P21757 451 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 RBMXP38159 391 aaKnown RBP11.13□□□□□ -0.63
RPS28-204ENST00000602140 LIMS1P48059 325 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 LCN6P62502 163 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 TNFAIP6P98066 277 aaPredicted RBP11.13□□□□□ -0.63
RPS28-204ENST00000602140 PRKCDQ05655 676 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 PSG7Q13046 419 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 FHL1Q13642 323 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 ZMAT1Q5H9K5 638 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 MTX3Q5HYI7 312 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 ARL9Q6T311 187 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 TREML1Q86YW5 311 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 BPIFB2Q8N4F0 458 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 PCYOX1LQ8NBM8 494 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 ST7LQ8TDW4 575 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 C22orf15Q8WYQ4 148 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 LZICQ8WZA0 190 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 DCLRE1CQ96SD1 692 aaKnown RBP11.13□□□□□ -0.63
RPS28-204ENST00000602140 DIRC2Q96SL1 478 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 FNDC11Q9BVV2 318 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 VIPAS39Q9H9C1 493 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 ESM1Q9NQ30 184 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 SAR1AQ9NR31 198 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 POLE4Q9NR33 117 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 MAN2C1Q9NTJ4 1040 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 GID8Q9NWU2 228 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 DCAF16Q9NXF7 216 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 SNX13Q9Y5W8 968 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 NPTNQ9Y639 398 aa11.13□□□□□ -0.63
RPS28-204ENST00000602140 ELOVL7A1L3X0 281 aa11.12□□□□□ -0.63
RPS28-204ENST00000602140 SPRY1O43609 319 aaPredicted RBP11.12□□□□□ -0.63
RPS28-204ENST00000602140 PRSS23O95084 383 aa11.12□□□□□ -0.63
RPS28-204ENST00000602140 SBK2P0C263 348 aa11.12□□□□□ -0.63
RPS28-204ENST00000602140 ZFP36P26651 326 aaKnown RBP11.12□□□□□ -0.63
RPS28-204ENST00000602140 CDK5R2Q13319 367 aa11.12□□□□□ -0.63
RPS28-204ENST00000602140 TRAM2Q15035 370 aa11.12□□□□□ -0.63
RPS28-204ENST00000602140 VTCN1Q7Z7D3 282 aa11.12□□□□□ -0.63
RPS28-204ENST00000602140 ZER1Q7Z7L7 766 aa11.12□□□□□ -0.63
RPS28-204ENST00000602140 SYT9Q86SS6 491 aa11.12□□□□□ -0.63
RPS28-204ENST00000602140 OFCC1Q8IZS5 231 aa11.12□□□□□ -0.63
RPS28-204ENST00000602140 ZDHHC22Q8N966 263 aa11.12□□□□□ -0.63
RPS28-204ENST00000602140 OR13C2Q8NGS9 318 aa11.12□□□□□ -0.63
RPS28-204ENST00000602140 ZMYND19Q96E35 227 aaPredicted RBP11.12□□□□□ -0.63
RPS28-204ENST00000602140 POFUT1Q9H488 388 aa11.12□□□□□ -0.63
RPS28-204ENST00000602140 EMC7Q9NPA0 242 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms