RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 SYNPRQ8TBG9 265 aa17.25■□□□□ 0.35
CIRBP-239ENST00000592467 MSI2Q96DH6 328 aaKnown RBP17.25■□□□□ 0.35
CIRBP-239ENST00000592467 LRMDAQ9H2I8 198 aa17.25■□□□□ 0.35
CIRBP-239ENST00000592467 TMEM160Q9NX00 188 aa17.25■□□□□ 0.35
CIRBP-239ENST00000592467 FAM53CQ9NYF3 392 aa17.25■□□□□ 0.35
CIRBP-239ENST00000592467 TAAR3PQ9P1P4 343 aa17.25■□□□□ 0.35
CIRBP-239ENST00000592467 AURKCQ9UQB9 309 aa17.25■□□□□ 0.35
CIRBP-239ENST00000592467 TIMM10BQ9Y5J6 103 aa17.25■□□□□ 0.35
CIRBP-239ENST00000592467 IER3IP1Q9Y5U9 82 aa17.25■□□□□ 0.35
CIRBP-239ENST00000592467 A0A1W2PPW3 197 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 TCRBV5S2A0A599 114 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 C5orf49A4QMS7 147 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 LRP5LA4QPB2 252 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 B2RBV5 119 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 DYNC1I1O14576 645 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 IGHV3-13P01766 116 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 FABP3P05413 133 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 LCKP06239 509 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 RRM2P31350 389 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 IL2RGP31785 369 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 GSSP48637 474 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 GZMKP49863 264 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 KLF3P57682 345 aaPredicted RBP17.24■□□□□ 0.35
CIRBP-239ENST00000592467 SMIM11AP58511 58 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 TRIP10Q15642 601 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 ALKBH6Q3KRA9 238 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 SMARCD3Q6STE5 483 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 RFPL4BQ6ZWI9 263 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 OR1J1Q8NGS3 322 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 C11orf40Q8WZ69 217 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 GTF3AQ92664 365 aaKnown RBP17.24■□□□□ 0.35
CIRBP-239ENST00000592467 YIPF5Q969M3 257 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 MARS2Q96GW9 593 aaKnown RBP17.24■□□□□ 0.35
CIRBP-239ENST00000592467 NSL1Q96IY1 281 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 WACQ9BTA9 647 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 SYT4Q9H2B2 425 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 ACTR3BQ9P1U1 418 aa17.24■□□□□ 0.35
CIRBP-239ENST00000592467 C17orf100A8MU93 164 aa17.23■□□□□ 0.35
CIRBP-239ENST00000592467 SOCS2O14508 198 aa17.23■□□□□ 0.35
CIRBP-239ENST00000592467 XKRYO14609 159 aa17.23■□□□□ 0.35
CIRBP-239ENST00000592467 MPZL1O95297 269 aa17.23■□□□□ 0.35
CIRBP-239ENST00000592467 NGFP01138 241 aa17.23■□□□□ 0.35
CIRBP-239ENST00000592467 APEHP13798 732 aaKnown RBP17.23■□□□□ 0.35
CIRBP-239ENST00000592467 CCNOP22674 350 aa17.23■□□□□ 0.35
CIRBP-239ENST00000592467 FPR3P25089 353 aa17.23■□□□□ 0.35
CIRBP-239ENST00000592467 MPV17P39210 176 aa17.23■□□□□ 0.35
CIRBP-239ENST00000592467 MAGEA2P43356 314 aa17.23■□□□□ 0.35
CIRBP-239ENST00000592467 MAGEB1P43366 347 aa17.23■□□□□ 0.35
CIRBP-239ENST00000592467 HMGA2P52926 109 aa17.23■□□□□ 0.35
CIRBP-239ENST00000592467 PCBD1P61457 104 aa17.23■□□□□ 0.35
CIRBP-239ENST00000592467 MXRA7P84157 204 aa17.23■□□□□ 0.35
CIRBP-239ENST00000592467 OTPQ5XKR4 325 aa17.23■□□□□ 0.35
CIRBP-239ENST00000592467 C1orf94Q6P1W5 598 aa17.23■□□□□ 0.35
CIRBP-239ENST00000592467 RINLQ6ZS11 566 aa17.23■□□□□ 0.35
CIRBP-239ENST00000592467 ZDHHC21Q8IVQ6 265 aa17.23■□□□□ 0.35
CIRBP-239ENST00000592467 C12orf71A8MTZ7 269 aa17.22■□□□□ 0.35
CIRBP-239ENST00000592467 DCTN6O00399 190 aa17.22■□□□□ 0.35
CIRBP-239ENST00000592467 SLC16A7O60669 478 aa17.22■□□□□ 0.35
CIRBP-239ENST00000592467 RP2O75695 350 aa17.22■□□□□ 0.35
CIRBP-239ENST00000592467 PPP1R3DO95685 299 aa17.22■□□□□ 0.35
CIRBP-239ENST00000592467 COX5BP10606 129 aa17.22■□□□□ 0.35
CIRBP-239ENST00000592467 GDI2P50395 445 aaKnown RBP17.22■□□□□ 0.35
CIRBP-239ENST00000592467 MNAT1P51948 309 aa17.22■□□□□ 0.35
CIRBP-239ENST00000592467 MRPS11P82912 194 aaKnown RBP17.22■□□□□ 0.35
CIRBP-239ENST00000592467 RFX4Q33E94 735 aa17.22■□□□□ 0.35
CIRBP-239ENST00000592467 CYP2R1Q6VVX0 501 aa17.22■□□□□ 0.35
CIRBP-239ENST00000592467 ADCK1Q86TW2 530 aa17.22■□□□□ 0.35
CIRBP-239ENST00000592467 MCUR1Q96AQ8 359 aa17.22■□□□□ 0.35
CIRBP-239ENST00000592467 C1orf159Q96HA4 380 aa17.22■□□□□ 0.35
CIRBP-239ENST00000592467 NDEL1Q9GZM8 345 aa17.22■□□□□ 0.35
CIRBP-239ENST00000592467 NUAK2Q9H093 628 aa17.22■□□□□ 0.35
CIRBP-239ENST00000592467 OR52D1Q9H346 318 aa17.22■□□□□ 0.35
CIRBP-239ENST00000592467 KRCC1Q9NPI7 259 aaPredicted RBP17.22■□□□□ 0.35
CIRBP-239ENST00000592467 HINT3Q9NQE9 182 aaKnown RBP17.22■□□□□ 0.35
CIRBP-239ENST00000592467 COA3Q9Y2R0 106 aaPredicted RBP17.22■□□□□ 0.35
CIRBP-239ENST00000592467 ARPC3O15145 178 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 KHDRBS3O75525 346 aaKnown RBP17.21■□□□□ 0.35
CIRBP-239ENST00000592467 IGFBP5P24593 272 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 MMP15P51511 669 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 RPS6KA3P51812 740 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 MS4A2Q01362 244 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 DBPQ10586 325 aaPredicted RBP17.21■□□□□ 0.35
CIRBP-239ENST00000592467 KCNMB1Q16558 191 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 NKPD1Q17RQ9 610 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 SPATA46Q5T0L3 261 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 MBNL2Q5VZF2 373 aaKnown RBP17.21■□□□□ 0.35
CIRBP-239ENST00000592467 PGBD2Q6P3X8 592 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 ALDH16A1Q8IZ83 802 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 OR4C15Q8NGM1 316 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 SLC25A40Q8TBP6 338 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 FANK1Q8TC84 345 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 IPCEF1Q8WWN9 437 aaPredicted RBP17.21■□□□□ 0.35
CIRBP-239ENST00000592467 RDH5Q92781 318 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 TSSK2Q96PF2 358 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 RACGAP1Q9H0H5 632 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 CHODLQ9H9P2 273 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 SLCO1C1Q9NYB5 712 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 NKIRAS2Q9NYR9 191 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 LYVE1Q9Y5Y7 322 aa17.21■□□□□ 0.35
CIRBP-239ENST00000592467 IGLV1-36A0A0B4J1U3 117 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms