RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 SGO1Q5FBB7 561 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 EEF1A1P5Q5VTE0 462 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 MEDAGQ5VYS4 303 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 OR2A2Q6IF42 318 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 ZNF770Q6IQ21 691 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-209ENST00000589941 CCBE1Q6UXH8 406 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-209ENST00000589941 KCTD20Q7Z5Y7 419 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 ANKRD46Q86W74 232 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 ADGRG3Q86Y34 549 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 SLC30A8Q8IWU4 369 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 LAS2Q8IYD9 372 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 BOLLQ8N9W6 283 aaKnown RBP6.73□□□□□ -1.33
SMAD4-209ENST00000589941 OR10G2Q8NGC3 310 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 OR6F1Q8NGZ6 308 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 OR14L1PQ8NHC6 308 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 SPSB4Q96A44 273 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 TMCO6Q96DC7 493 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 WDR34Q96EX3 536 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 TRNT1Q96Q11 434 aaKnown RBP6.73□□□□□ -1.33
SMAD4-209ENST00000589941 OR4K3Q96R72 315 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 PANX1Q96RD7 426 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 FEVQ99581 238 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 MAPKAP1Q9BPZ7 522 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 WWTR1Q9GZV5 400 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 TPK1Q9H3S4 243 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 POLE4Q9NR33 117 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 ABCB10Q9NRK6 738 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 SERTAD4Q9NUC0 356 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 CRNNQ9UBG3 495 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-209ENST00000589941 VPS29Q9UBQ0 182 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 COPS7AQ9UBW8 275 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 AASSQ9UDR5 926 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 TBC1D24Q9ULP9 559 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 EXO1Q9UQ84 846 aaKnown RBP6.73□□□□□ -1.33
SMAD4-209ENST00000589941 IQCMA0A1B0GVH7 501 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 MYO1GB0I1T2 1018 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 H7C417 338 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 TNFRSF11BO00300 401 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 SMAD9O15198 467 aaKnown RBP6.72□□□□□ -1.33
SMAD4-209ENST00000589941 TBX19O60806 448 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 DIRAS1O95057 198 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 NTN1O95631 604 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 IGLV2-14P01704 120 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 LAMP1P11279 417 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 COX7A2P14406 83 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 DDX5P17844 614 aaKnown RBP6.72□□□□□ -1.33
SMAD4-209ENST00000589941 TNNI3P19429 210 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 RRM2P31350 389 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 LIM2P55344 173 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 B3GALT5-AS1P59052 145 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 COPZ1P61923 177 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 REEP5Q00765 189 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 CHIT1Q13231 466 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 NAE1Q13564 534 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 MAPK11Q15759 364 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 SSX1Q16384 188 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 SPIN4Q56A73 249 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 ARMCX4Q5H9R4 360 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 SLC25A30Q5SVS4 291 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 ZNF544Q6NX49 715 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 OR4N5Q8IXE1 308 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 ZNF595Q8IYB9 648 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 CLECL1Q8IZS7 167 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 ZDHHC22Q8N966 263 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 OR4K1Q8NGD4 311 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 OR1J4Q8NGS1 313 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 ZNF418Q8TF45 676 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-209ENST00000589941 GEMIN6Q8WXD5 167 aaKnown RBP6.72□□□□□ -1.33
SMAD4-209ENST00000589941 MTERF3Q96E29 417 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 SENP5Q96HI0 755 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-209ENST00000589941 RNF170Q96K19 258 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 DGAT2Q96PD7 388 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 PIMREGQ9BSJ6 248 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 CENPOQ9BU64 300 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 PINK1Q9BXM7 581 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 BPESC1Q9GZL8 116 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 OR51E2Q9H255 320 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 HEATR1Q9H583 2144 aaKnown RBP6.72□□□□□ -1.33
SMAD4-209ENST00000589941 NEK6Q9HC98 313 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 ENPP4Q9Y6X5 453 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 SPACA6W5XKT8 324 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 HERC2O95714 4834 aa6.72□□□□□ -1.33
SMAD4-209ENST00000589941 HMX3A6NHT5 357 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 E7EQL1 145 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 FOXE1O00358 373 aaPredicted RBP6.71□□□□□ -1.34
SMAD4-209ENST00000589941 CCRL2O00421 344 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 ERI3O43414 337 aaKnown RBP6.71□□□□□ -1.34
SMAD4-209ENST00000589941 FGF17O60258 216 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 GPX5O75715 221 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 SEMA3DO95025 777 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 TBX6O95947 436 aaPredicted RBP6.71□□□□□ -1.34
SMAD4-209ENST00000589941 ADAP00813 363 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 APOA1P02647 267 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 ADRA2AP08913 450 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 CSF3P09919 207 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 DBTP11182 482 aaKnown RBP6.71□□□□□ -1.34
SMAD4-209ENST00000589941 NPPBP16860 134 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 TIA1P31483 386 aaKnown RBP eCLIP6.71□□□□□ -1.34
SMAD4-209ENST00000589941 SOX6P35712 828 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 RPL3P39023 403 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms