RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 VIPR2P41587 438 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 PCBD1P61457 104 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 GPM6BQ13491 265 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 GPNMBQ14956 572 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 HNRNPA1L2Q32P51 320 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 ABHD17CQ6PCB6 329 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 PADI1Q9ULC6 663 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 HS3ST2Q9Y278 367 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 AP4M1O00189 453 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 CLDN1O95832 211 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 WNT1P04628 370 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 ALOX5APP20292 161 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 SUMO1P63165 101 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 EGR3Q06889 387 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 ARHGAP11BQ3KRB8 267 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 C4orf17Q53FE4 359 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 EMC4Q5J8M3 183 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 OLIG3Q7RTU3 272 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 SLC16A11Q8NCK7 471 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 ZFPM2Q8WW38 1151 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 BCO1Q9HAY6 547 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 MYO10Q9HD67 2058 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 NID1P14543 1247 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 FABP6P51161 128 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 TLE1Q04724 770 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 Q96M85 177 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 KCNG2Q9UJ96 466 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 GLAP06280 429 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 ZNF865P0CJ78 1059 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 MGST1P10620 155 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 FABP4P15090 132 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 RPA2P15927 270 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 TOMM34Q15785 309 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 VAMP3Q15836 100 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 BTNL8Q6UX41 500 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 EXD3Q8N9H8 876 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 INSM2Q96T92 566 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 PLEKHB1Q9UF11 243 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 GABRQQ9UN88 632 aa13.39□□□□□ -0.27
SMARCA4-214ENST00000589677 J3QR89 54 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 ZNF626Q68DY1 528 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 CPEB2Q7Z5Q1 589 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 LRRTM1Q86UE6 522 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 SIGLECL1Q8N7X8 197 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 DUSP22Q9NRW4 184 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 CLDN2P57739 230 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 BCL7CQ8WUZ0 217 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 POMT1Q9Y6A1 747 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 A0A1B0GTL3 188 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 RAB27BO00194 218 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 HIST1H1CP16403 213 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 ACKR3P25106 362 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 GUK1Q16774 197 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 PHLDA2Q53GA4 152 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 OR13D1Q8NGV5 346 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 APOBEC3BQ9UH17 382 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 ZNF230Q9UIE0 474 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 GALR3O60755 368 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 MT-ATP6P00846 226 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 APEHP13798 732 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 C1orf61Q13536 156 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 OR52W1Q6IF63 320 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 MCATQ8IVS2 390 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 GCNT2Q8N0V5 402 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 FBXL6Q8N531 539 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 LMNTD1Q8N9Z9 388 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 PIGCQ92535 297 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 SUCNR1Q9BXA5 334 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 HIPK2Q9H2X6 1198 aa13.38□□□□□ -0.27
SMARCA4-214ENST00000589677 CST4P01036 141 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 INHBBP09529 407 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 SLC22A12Q96S37 553 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 SEC14L6B5MCN3 397 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 ACTL6BO94805 426 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 BMPR1AP36894 532 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 DUSP8Q13202 625 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 TMEM201Q5SNT2 666 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 ZNF684Q5T5D7 378 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 SUMF1Q8NBK3 374 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 GPR119Q8TDV5 335 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 SLC23A2Q9UGH3 650 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 NHSL1Q5SYE7 1610 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 CNMDO75829 334 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 C1QAP02745 245 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 CD63P08962 238 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 AKR1C3P42330 323 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 RABIFP47224 123 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 CSNK1G2P78368 415 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 PLXDC1Q8IUK5 500 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 RXFP4Q8TDU9 374 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 NXT1Q9UKK6 140 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 TMEM218A2RU14 115 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 POM121BA6NF01 834 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 PRKRAO75569 313 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 SPP1P10451 314 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 KCNJ3P48549 501 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 LIM2P55344 173 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 RNF165Q6ZSG1 346 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 MISPQ8IVT2 679 aa13.37□□□□□ -0.27
SMARCA4-214ENST00000589677 TMEM123Q8N131 208 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms